RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 DCP1AQ9NPI6 582 aaPredicted RBP14.77□□□□□ -0.04
SCAF4-201ENST00000286835 SPATA31A1Q5TZJ5 1347 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 ANO9A1A5B4 782 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 GCOM1H8Y6P7 765 aaPredicted RBP14.77□□□□□ -0.04
SCAF4-201ENST00000286835 PALMO75781 387 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 MYZAPP0CAP1 466 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 CARSP49589 748 aaKnown RBP14.77□□□□□ -0.04
SCAF4-201ENST00000286835 RPS6KA1Q15418 735 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 DIXDC1Q155Q3 683 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 NEK8Q86SG6 692 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 UHMK1Q8TAS1 419 aaKnown RBP14.77□□□□□ -0.04
SCAF4-201ENST00000286835 AP1M1Q9BXS5 423 aa14.77□□□□□ -0.04
SCAF4-201ENST00000286835 RIC1Q4ADV7 1423 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 GSTO1P78417 241 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 IL17AQ16552 155 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 FAM133AQ8N9E0 248 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 PLEKHG2Q9H7P9 1386 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 TARSL2A2RTX5 802 aaKnown RBP14.77□□□□□ -0.05
SCAF4-201ENST00000286835 POTEMA6NI47 508 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 NR1D1P20393 614 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 SLC20A2Q08357 652 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 DPP8Q6V1X1 898 aaPredicted RBP14.77□□□□□ -0.05
SCAF4-201ENST00000286835 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.77□□□□□ -0.05
SCAF4-201ENST00000286835 GOLPH3Q9H4A6 298 aa14.77□□□□□ -0.05
SCAF4-201ENST00000286835 KIF13AQ9H1H9 1805 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 ABCC6O95255 1503 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 KRT71Q3SY84 523 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 KRT25Q7Z3Z0 450 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 DYDC1Q8WWB3 177 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 DNAJC7Q99615 494 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 TRIM9Q9C026 710 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 PAPD7Q5XG87 772 aaKnown RBP14.76□□□□□ -0.05
SCAF4-201ENST00000286835 VPS36Q86VN1 386 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 ZIM3Q96PE6 472 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 ARPP21Q9UBL0 812 aaPredicted RBP14.76□□□□□ -0.05
SCAF4-201ENST00000286835 MYO1FO00160 1098 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 ADAMTS3O15072 1205 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 ASIC2Q16515 512 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 MAN2A1Q16706 1144 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 COA7Q96BR5 231 aa14.76□□□□□ -0.05
SCAF4-201ENST00000286835 PDS5AQ29RF7 1337 aaKnown RBP14.76□□□□□ -0.05
SCAF4-201ENST00000286835 MED1Q15648 1581 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-201ENST00000286835 EIF3HO15372 352 aaKnown RBP eCLIP14.75□□□□□ -0.05
SCAF4-201ENST00000286835 SERPINB2P05120 415 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 FGFR2P21802 821 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 ARFGAP2Q8N6H7 521 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 KRT13P13646 458 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 MCTP2Q6DN12 878 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 EMBQ6PCB8 327 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 IRF2BP1Q8IU81 584 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 LARP4BQ92615 738 aaKnown RBP14.75□□□□□ -0.05
SCAF4-201ENST00000286835 MYCBPQ99417 103 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-201ENST00000286835 TMEM260Q9NX78 707 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 LRRC10BA6NIK2 292 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 HLA-DOAP06340 250 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 GTF2IP78347 998 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 DNAAF5Q86Y56 855 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 TEX11Q8IYF3 940 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 MYOCDQ8IZQ8 938 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 GIMAP8Q8ND71 665 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-201ENST00000286835 OR2W6PQ8NHA6 318 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 VEZTQ9HBM0 779 aa14.75□□□□□ -0.05
SCAF4-201ENST00000286835 TMEM110-MUSTN1A8MSY1 372 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 NF2P35240 595 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 TTI2Q6NXR4 508 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 GJA10Q969M2 543 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 PIGSQ96S52 555 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 RCAN1P53805 252 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 TSEN2Q8NCE0 465 aaKnown RBP14.74□□□□□ -0.05
SCAF4-201ENST00000286835 BRIP1Q9BX63 1249 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 SH2D4AQ9H788 454 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 PCDHA6Q9UN73 950 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 PLAAQ9Y263 795 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.74□□□□□ -0.05
SCAF4-201ENST00000286835 PCDHA8Q9Y5H6 950 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 MRC1P22897 1456 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 CRYBG1Q9Y4K1 1723 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 H0YIN7 160 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 E2F5Q15329 346 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 DAAM2Q86T65 1068 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 CELF1Q92879 486 aaKnown RBP14.74□□□□□ -0.05
SCAF4-201ENST00000286835 SHISA4Q96DD7 197 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 GPR101Q96P66 508 aaPredicted RBP14.74□□□□□ -0.05
SCAF4-201ENST00000286835 RHOBTB3O94955 611 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 ARHGAP20Q9P2F6 1191 aa14.74□□□□□ -0.05
SCAF4-201ENST00000286835 FRMD3A2A2Y4 597 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 RPS6KA4O75676 772 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 ABCB4P21439 1286 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 DOK7Q18PE1 504 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 ALS2CLQ60I27 953 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 TBC1D9BQ66K14 1250 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 ZNF772Q68DY9 489 aaPredicted RBP14.73□□□□□ -0.05
SCAF4-201ENST00000286835 CCDC25Q86WR0 208 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 LRRC47Q8N1G4 583 aaKnown RBP14.73□□□□□ -0.05
SCAF4-201ENST00000286835 ARHGEF1Q92888 912 aaKnown RBP14.73□□□□□ -0.05
SCAF4-201ENST00000286835 EYA3Q99504 573 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 KRIT1O00522 736 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 KLRK1P26718 216 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 ACTN3Q08043 901 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms