RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 VEGFBP49765 207 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 CNTN2Q02246 1040 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 CALCRLQ16602 461 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 TPRNQ4KMQ1 711 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 CEP55Q53EZ4 464 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 XRRA1Q6P2D8 792 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 FAM133AQ8N9E0 248 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 IL31RAQ8NI17 732 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 CLIC6Q96NY7 704 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 MTMR9Q96QG7 549 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 TMEM63CQ9P1W3 806 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 DNAJC25-GNG10A0A024R161 153 aa21.42■■□□□ 1.02
PDLIM3-202ENST00000284770 HTRA3P83110 453 aa21.42■■□□□ 1.02
PDLIM3-202ENST00000284770 PRR16Q569H4 304 aa21.42■■□□□ 1.02
PDLIM3-202ENST00000284770 ABRAQ8N0Z2 381 aa21.42■■□□□ 1.02
PDLIM3-202ENST00000284770 ZNF579Q8NAF0 562 aaKnown RBP21.42■■□□□ 1.02
PDLIM3-202ENST00000284770 CYP2W1Q8TAV3 490 aa21.42■■□□□ 1.02
PDLIM3-202ENST00000284770 LENG9Q96B70 501 aa21.42■■□□□ 1.02
PDLIM3-202ENST00000284770 IGLV3-22A0A075B6J6 115 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 GRIN1Q05586 938 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 IL17AQ16552 155 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 DTHD1Q6ZMT9 781 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 VSIG10LQ86VR7 867 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 IWS1Q96ST2 819 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 KCNMB3Q9NPA1 279 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 ADD3Q9UEY8 706 aaKnown RBP21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 IVNS1ABPQ9Y6Y0 642 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 PGK2P07205 417 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 NR3C2P08235 984 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 MRPS9P82933 396 aaKnown RBP21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 GPR142Q7Z601 462 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 MXRA8Q9BRK3 442 aa21.41■■□□□ 1.02
PDLIM3-202ENST00000284770 ASTN1O14525 1302 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 VWA3AA6NCI4 1184 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 SOWAHBA6NEL2 793 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 MEIS1O00470 390 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 TBX3O15119 743 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 MYCLP12524 364 aaPredicted RBP21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 LIG1P18858 919 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 CMA1P23946 247 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 CCND2P30279 289 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 HAS1Q92839 578 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 CSRNP2Q9H175 543 aa21.4■■□□□ 1.02
PDLIM3-202ENST00000284770 ITGB5P18084 799 aa21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 ALDH5A1P51649 535 aaPredicted RBP21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 SHC4Q6S5L8 630 aa21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 NIPA1Q7RTP0 329 aa21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 PLEKHH3Q7Z736 793 aa21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 PLA2G4DQ86XP0 818 aa21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 ETNPPLQ8TBG4 499 aa21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 ZFP91Q96JP5 570 aaPredicted RBP21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 UBIAD1Q9Y5Z9 338 aa21.39■■□□□ 1.01
PDLIM3-202ENST00000284770 ADORA2AP29274 412 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 TXKP42681 527 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 SETQ01105 290 aaPredicted RBP21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 RESP18Q5W5W9 173 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 SLFN12Q8IYM2 578 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 LCTP09848 1927 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 MARCH6O60337 910 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 STAM2O75886 525 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 LONP1P36776 959 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 GRB14Q14449 540 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 MRPS27Q92552 414 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 FAM20AQ96MK3 541 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 JADE2Q9NQC1 790 aa21.38■■□□□ 1.01
PDLIM3-202ENST00000284770 B4DLN1 442 aa21.37■■□□□ 1.01
PDLIM3-202ENST00000284770 MSH4O15457 936 aa21.37■■□□□ 1.01
PDLIM3-202ENST00000284770 EDNRBP24530 442 aa21.37■■□□□ 1.01
PDLIM3-202ENST00000284770 ZSCAN23Q3MJ62 389 aa21.37■■□□□ 1.01
PDLIM3-202ENST00000284770 FSIP1Q8NA03 581 aa21.37■■□□□ 1.01
PDLIM3-202ENST00000284770 FGD4Q96M96 766 aa21.37■■□□□ 1.01
PDLIM3-202ENST00000284770 LOC102724159A0A0B4J2E5 919 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 SLC15A5A6NIM6 579 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 TECP42680 631 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 FXR2P51116 673 aaKnown RBP eCLIP21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 PWP2Q15269 919 aaKnown RBP21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 STXBP2Q15833 593 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 SPECC1Q5M775 1068 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 SYAP1Q96A49 352 aaPredicted RBP21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 MPHOSPH6Q99547 160 aaKnown RBP21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 CFHR5Q9BXR6 569 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 WDR11Q9BZH6 1224 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 GOLPH3LQ9H4A5 285 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 TTC12Q9H892 705 aaPredicted RBP21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 PCDHA12Q9UN75 941 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 A0A1B0GVL5 298 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 COBLO75128 1261 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 ARP10275 920 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 TMEM266Q2M3C6 531 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 ZNF792Q3KQV3 632 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 IGSF22Q8N9C0 903 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 GJA10Q969M2 543 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 AK8Q96MA6 479 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 INPP4AQ96PE3 977 aaPredicted RBP21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 KCNH7Q9NS40 1196 aa21.36■■□□□ 1.01
PDLIM3-202ENST00000284770 FAM237AA0A1B0GTK4 181 aa21.35■■□□□ 1.01
PDLIM3-202ENST00000284770 NR1I2O75469 434 aa21.35■■□□□ 1.01
PDLIM3-202ENST00000284770 EIF3JO75822 258 aaKnown RBP21.35■■□□□ 1.01
PDLIM3-202ENST00000284770 MTMR1Q13613 665 aa21.35■■□□□ 1.01
PDLIM3-202ENST00000284770 PDIA5Q14554 519 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms