RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 BFSP2Q13515 415 aa14.84□□□□□ -0.03
CD44-203ENST00000278386 SEC23AQ15436 765 aa14.84□□□□□ -0.03
CD44-203ENST00000278386 PTGISQ16647 500 aa14.84□□□□□ -0.03
CD44-203ENST00000278386 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
CD44-203ENST00000278386 RALYLQ86SE5 291 aaKnown RBP14.84□□□□□ -0.03
CD44-203ENST00000278386 MAD2L2Q9UI95 211 aa14.84□□□□□ -0.03
CD44-203ENST00000278386 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
CD44-203ENST00000278386 PCDHA11Q9Y5I1 949 aa14.84□□□□□ -0.03
CD44-203ENST00000278386 SPTBN5Q9NRC6 3674 aaKnown RBP14.84□□□□□ -0.03
CD44-203ENST00000278386 ZBTB5O15062 677 aa14.83□□□□□ -0.04
CD44-203ENST00000278386 NR3C2P08235 984 aa14.83□□□□□ -0.04
CD44-203ENST00000278386 MYCLP12524 364 aaPredicted RBP14.83□□□□□ -0.04
CD44-203ENST00000278386 MYOGP15173 224 aa14.83□□□□□ -0.04
CD44-203ENST00000278386 CASTP20810 708 aaKnown RBP14.83□□□□□ -0.04
CD44-203ENST00000278386 MICALL1Q8N3F8 863 aa14.83□□□□□ -0.04
CD44-203ENST00000278386 SYMPKQ92797 1274 aaKnown RBP14.83□□□□□ -0.04
CD44-203ENST00000278386 PRDM6Q9NQX0 595 aa14.83□□□□□ -0.04
CD44-203ENST00000278386 PCDHA1Q9Y5I3 950 aa14.83□□□□□ -0.04
CD44-203ENST00000278386 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
CD44-203ENST00000278386 CHD9Q3L8U1 2897 aa14.83□□□□□ -0.04
CD44-203ENST00000278386 OPLAHO14841 1288 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 IFIT3O14879 490 aaKnown RBP14.82□□□□□ -0.04
CD44-203ENST00000278386 SORBS3O60504 671 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 CYP21A2P08686 494 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 IQCF3P0C7M6 154 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 ZNF286BP0CG31 522 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 HOXA13P31271 388 aaPredicted RBP14.82□□□□□ -0.04
CD44-203ENST00000278386 HSD17B4P51659 736 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
CD44-203ENST00000278386 ADGRE1Q14246 886 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 GRM4Q14833 912 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 WTAPQ15007 396 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 SART3Q15020 963 aaKnown RBP14.82□□□□□ -0.04
CD44-203ENST00000278386 CCDC85BQ15834 202 aaPredicted RBP14.82□□□□□ -0.04
CD44-203ENST00000278386 DGKDQ16760 1214 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 TMEM67Q5HYA8 995 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 GDF6Q6KF10 455 aaPredicted RBP14.82□□□□□ -0.04
CD44-203ENST00000278386 CAGE1Q8TC20 777 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 VWCEQ96DN2 955 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 SLC9A7Q96T83 725 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 ALG1Q9BT22 464 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 KATNAL1Q9BW62 490 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 THEGQ9P2T0 379 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 CHD7Q9P2D1 2997 aa14.82□□□□□ -0.04
CD44-203ENST00000278386 PPP1R11O60927 126 aaPredicted RBP14.81□□□□□ -0.04
CD44-203ENST00000278386 EIF3JO75822 258 aaKnown RBP14.81□□□□□ -0.04
CD44-203ENST00000278386 CHMLP26374 656 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 KCNJ6P48051 423 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 PSEN2P49810 448 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 PTH1RQ03431 593 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 TJAP1Q5JTD0 557 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 DHX37Q8IY37 1157 aaKnown RBP14.81□□□□□ -0.04
CD44-203ENST00000278386 C7orf31Q8N865 590 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 NCOA7Q8NI08 942 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 AFAP1L1Q8TED9 768 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 PIGSQ96S52 555 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 PDCD2LQ9BRP1 358 aa14.81□□□□□ -0.04
CD44-203ENST00000278386 DDX41Q9UJV9 622 aaKnown RBP14.81□□□□□ -0.04
CD44-203ENST00000278386 MICAL3Q7RTP6 2002 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 PALM3A6NDB9 673 aaPredicted RBP14.8□□□□□ -0.04
CD44-203ENST00000278386 CA3P07451 260 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 CCND2P30279 289 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 LAMC2Q13753 1193 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 MFSD10Q14728 455 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 PGM5Q15124 567 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 LRRC8DQ7L1W4 858 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 SESTD1Q86VW0 696 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 IL31RAQ8NI17 732 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 PPTC7Q8NI37 304 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 KAT2BQ92831 832 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 EMID1Q96A84 441 aaPredicted RBP14.8□□□□□ -0.04
CD44-203ENST00000278386 MTMR8Q96EF0 704 aa14.8□□□□□ -0.04
CD44-203ENST00000278386 E7EWF7 191 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 GCOM1H8Y6P7 765 aaPredicted RBP14.79□□□□□ -0.04
CD44-203ENST00000278386 BAIAP3O94812 1187 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 GGPS1O95749 300 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 POLR2MP0CAP2 368 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 GHRHRQ02643 423 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 TRAF1Q13077 416 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 KIAA0753Q2KHM9 967 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 CATIPQ7Z7H3 387 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 FCHSD1Q86WN1 690 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 PIBF1Q8WXW3 757 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 SPATA33Q96N06 139 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 CERS4Q9HA82 394 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 SENP2Q9HC62 589 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
CD44-203ENST00000278386 HDAC6Q9UBN7 1215 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 GTF2IRD1Q9UHL9 959 aa14.79□□□□□ -0.04
CD44-203ENST00000278386 KAT6AQ92794 2004 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 TCF20Q9UGU0 1960 aaKnown RBP14.78□□□□□ -0.04
CD44-203ENST00000278386 SIP14410 1827 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 KIF28PB7ZC32 967 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 F2P00734 622 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 SELPP16109 830 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 UBA1P22314 1058 aaKnown RBP14.78□□□□□ -0.04
CD44-203ENST00000278386 SLC35G1Q2M3R5 365 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 KCNV1Q6PIU1 500 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 STOX1Q6ZVD7 989 aa14.78□□□□□ -0.04
CD44-203ENST00000278386 SAMD3Q8N6K7 520 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms