RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SH2D4AQ9H788 454 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 BICDL2A1A5D9 508 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 GLI1P08151 1106 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 CCDC40Q4G0X9 1142 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 BCAS4Q8TDM0 211 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 MXD3Q9BW11 206 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 C6orf50Q9HD87 102 aa18.62■□□□□ 0.57
SQLE-201ENST00000265896 FAM196BA6NMK8 535 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 BACH1O14867 736 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 ACTN1P12814 892 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 GUCY2DQ02846 1103 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 RAPGEF1Q13905 1077 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 SHROOM1Q2M3G4 852 aaPredicted RBP18.61■□□□□ 0.57
SQLE-201ENST00000265896 AMOTL1Q8IY63 956 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 LARP4BQ92615 738 aaKnown RBP18.61■□□□□ 0.57
SQLE-201ENST00000265896 ADAMTS1Q9UHI8 967 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 LRP5O75197 1615 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 E9PMD0 336 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 IVLP07476 585 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 IBSPP21815 317 aaPredicted RBP18.61■□□□□ 0.57
SQLE-201ENST00000265896 MKRN1Q9UHC7 482 aaKnown RBP18.61■□□□□ 0.57
SQLE-201ENST00000265896 SIK3Q9Y2K2 1263 aa18.61■□□□□ 0.57
SQLE-201ENST00000265896 STAT3P40763 770 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 SBK1Q52WX2 424 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 CNNM4Q6P4Q7 775 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 FAM133AQ8N9E0 248 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 TBC1D5Q92609 795 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 IKZF4Q9H2S9 585 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 EPB41L5Q9HCM4 733 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 PLAGL2Q9UPG8 496 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 PALMO75781 387 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 C8orf74Q6P047 294 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 KCTD1Q719H9 257 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 EHBP1Q8NDI1 1231 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 KRT12Q99456 494 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 ZMYND12Q9H0C1 365 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 JRKLQ9Y4A0 524 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 ANKRD36CQ5JPF3 1778 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 MEIS1O00470 390 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 RIMBP2O15034 1052 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 IRAK1P51617 712 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 LSM14BQ9BX40 385 aaKnown RBP18.6■□□□□ 0.57
SQLE-201ENST00000265896 TLR10Q9BXR5 811 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 BCS1LQ9Y276 419 aa18.6■□□□□ 0.57
SQLE-201ENST00000265896 PCP11498 1178 aaKnown RBP18.59■□□□□ 0.57
SQLE-201ENST00000265896 HAUS3Q68CZ6 603 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 TRIM58Q8NG06 486 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 MPHOSPH10O00566 681 aaKnown RBP18.59■□□□□ 0.57
SQLE-201ENST00000265896 KCNMA1Q12791 1236 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 TTMPQ5BVD1 217 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 DDX42Q86XP3 938 aaKnown RBP eCLIP18.59■□□□□ 0.57
SQLE-201ENST00000265896 CCDC170Q8IYT3 715 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 OR2W6PQ8NHA6 318 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 CCDC43Q96MW1 224 aaKnown RBP18.59■□□□□ 0.57
SQLE-201ENST00000265896 RUFY1Q96T51 708 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 C7orf25Q9BPX7 421 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 NUP58Q9BVL2 599 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 FAM184BQ9ULE4 1060 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
SQLE-201ENST00000265896 USP17L15C9J2P7 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L13C9JLJ4 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L11C9JVI0 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L18D6R9N7 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L22D6RA61 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L17D6RBQ6 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L19D6RCP7 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L20D6RJB6 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 EDIL3O43854 480 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 TLR2O60603 784 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 KLRC1P26715 233 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 GNAQP50148 359 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L24Q0WX57 530 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 USP17L6PQ6QN14 398 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 FAM114A1Q8IWE2 563 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 HYOU1Q9Y4L1 999 aa18.58■□□□□ 0.57
SQLE-201ENST00000265896 BAG3O95817 575 aa18.58■□□□□ 0.56
SQLE-201ENST00000265896 HPDP32754 393 aaPredicted RBP18.58■□□□□ 0.56
SQLE-201ENST00000265896 GUCY1A3Q02108 690 aa18.58■□□□□ 0.56
SQLE-201ENST00000265896 CCDC70Q6NSX1 233 aa18.58■□□□□ 0.56
SQLE-201ENST00000265896 KRT25Q7Z3Z0 450 aa18.58■□□□□ 0.56
SQLE-201ENST00000265896 DHX37Q8IY37 1157 aaKnown RBP18.58■□□□□ 0.56
SQLE-201ENST00000265896 AENQ8WTP8 325 aaKnown RBP18.58■□□□□ 0.56
SQLE-201ENST00000265896 SH3GLB2Q9NR46 395 aa18.58■□□□□ 0.56
SQLE-201ENST00000265896 AMPD3Q01432 767 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 CENPPQ6IPU0 288 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
SQLE-201ENST00000265896 TPTE2Q6XPS3 522 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 ERGIC2Q96RQ1 377 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 SPATA31A1Q5TZJ5 1347 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 UFL1O94874 794 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 KLHDC7AQ5VTJ3 777 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 DPP8Q6V1X1 898 aaPredicted RBP18.57■□□□□ 0.56
SQLE-201ENST00000265896 BAP1Q92560 729 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 ZIM3Q96PE6 472 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 ALS2CR12Q96Q35 445 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 AP1M1Q9BXS5 423 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 CAPS2Q9BXY5 557 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 HEXIM1O94992 359 aaKnown RBP18.57■□□□□ 0.56
SQLE-201ENST00000265896 GNA11P29992 359 aa18.57■□□□□ 0.56
SQLE-201ENST00000265896 TM4SF1P30408 202 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms