RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 CENPUQ71F23 418 aa11.62□□□□□ -0.55
CPT1A-201ENST00000265641 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.62□□□□□ -0.55
CPT1A-201ENST00000265641 SEC16BQ96JE7 1060 aa11.62□□□□□ -0.55
CPT1A-201ENST00000265641 KDM4CQ9H3R0 1056 aa11.62□□□□□ -0.55
CPT1A-201ENST00000265641 NHEJ1Q9H9Q4 299 aaPredicted RBP11.62□□□□□ -0.55
CPT1A-201ENST00000265641 GGA2Q9UJY4 613 aa11.62□□□□□ -0.55
CPT1A-201ENST00000265641 PARP3Q9Y6F1 533 aa11.62□□□□□ -0.55
CPT1A-201ENST00000265641 PTCH1Q13635 1447 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 FOXP2O15409 715 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 CPP00450 1065 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 PYGBP11216 843 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 ADCY8P40145 1251 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 EHHADHQ08426 723 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 PTGISQ16647 500 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 CCNI2Q6ZMN8 369 aaPredicted RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 DHX40Q8IX18 779 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 MAK16Q9BXY0 300 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 FAM192AQ9GZU8 254 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 ALDH8A1Q9H2A2 487 aaPredicted RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 ETNK1Q9HBU6 452 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 ATXN2Q99700 1313 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 IQCA1LA6NCM1 817 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 MBD4O95243 580 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 KRT75O95678 551 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 RPN1P04843 607 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 LONP1P36776 959 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 ARMCX5Q6P1M9 558 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 YTHDF3Q7Z739 585 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 CYFIP2Q96F07 1278 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 METTL22Q9BUU2 404 aaPredicted RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 KCND1Q9NSA2 647 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 PCDHA13Q9Y5I0 950 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 MAP3K4Q9Y6R4 1608 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 BUB1O43683 1085 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 RCN2Q14257 317 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 PALM2Q8IXS6 379 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 KLHL23Q8NBE8 558 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 TRIM55Q9BYV6 548 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 CD248Q9HCU0 757 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 LIN7AO14910 233 aaPredicted RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 ATG16L1Q676U5 607 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 SESTD1Q86VW0 696 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 LRRC43Q8N309 656 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 HINFPQ9BQA5 517 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 MYL10Q9BUA6 226 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 SLITRK6Q9H5Y7 841 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 METTL14Q9HCE5 456 aaKnown RBP11.61□□□□□ -0.55
CPT1A-201ENST00000265641 ZFP69BQ9UJL9 534 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
CPT1A-201ENST00000265641 MYO1FO00160 1098 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 AGTP01019 485 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 TPP2P29144 1249 aaPredicted RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 HDAC4P56524 1084 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 LETM2Q2VYF4 491 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 ZNF658Q5TYW1 1059 aaPredicted RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 HAUS3Q68CZ6 603 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 ICA1LQ8NDH6 482 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 NLRC4Q9NPP4 1024 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 A1CFQ9NQ94 594 aaKnown RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 SEPT3Q9UH03 358 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 IPO5O00410 1097 aaKnown RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 GNAT1P11488 350 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 VHLP40337 213 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 TRAPPC10P48553 1259 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 SERPINB4P48594 390 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 PSMD6Q15008 389 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 NAA35Q5VZE5 725 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 FAM186BQ8IYM0 893 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 CATSPER2Q96P56 530 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 FOXP1Q9H334 677 aaPredicted RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 NEURL4Q96JN8 1562 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 HAUS5O94927 633 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 ADD1P35611 737 aaKnown RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 OPTNQ96CV9 577 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 ABHD10Q9NUJ1 306 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 CCDC87Q9NVE4 849 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 TRAF3IP3Q9Y228 551 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 KRT3P12035 628 aa11.6□□□□□ -0.55
CPT1A-201ENST00000265641 MAGOHP61326 146 aaKnown RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 MAGOHBQ96A72 148 aaKnown RBP11.6□□□□□ -0.55
CPT1A-201ENST00000265641 FAM187AA6NFU0 413 aa11.59□□□□□ -0.55
CPT1A-201ENST00000265641 SERPING1P05155 500 aa11.59□□□□□ -0.55
CPT1A-201ENST00000265641 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
CPT1A-201ENST00000265641 PECAM1P16284 738 aaPredicted RBP11.59□□□□□ -0.55
CPT1A-201ENST00000265641 GJC1P36383 396 aa11.59□□□□□ -0.55
CPT1A-201ENST00000265641 NECTIN1Q15223 517 aa11.59□□□□□ -0.55
CPT1A-201ENST00000265641 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
CPT1A-201ENST00000265641 CASP10Q92851 521 aa11.59□□□□□ -0.55
CPT1A-201ENST00000265641 PGBD1Q96JS3 809 aa11.59□□□□□ -0.55
CPT1A-201ENST00000265641 AGTPBP1Q9UPW5 1226 aa11.59□□□□□ -0.55
CPT1A-201ENST00000265641 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms