RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 PIGSQ96S52 555 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 THAP9Q9H5L6 903 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 AMFRQ9UKV5 643 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 SNX12Q9UMY4 172 aa18.76■□□□□ 0.59
SRF-201ENST00000265354 EPB41P11171 864 aaKnown RBP18.75■□□□□ 0.59
SRF-201ENST00000265354 XRCC5P13010 732 aaKnown RBP18.75■□□□□ 0.59
SRF-201ENST00000265354 MRPL12P52815 198 aaKnown RBP18.75■□□□□ 0.59
SRF-201ENST00000265354 IL17RAQ96F46 866 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 PSD3Q9NYI0 1048 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 LRRN2O75325 713 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 NR2F2P24468 414 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 SLC16A2P36021 539 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 NTRK3Q16288 839 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 RETREG2Q8NC44 543 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 CUL5Q93034 780 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 PPP1R2P41236 205 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 NEDD9Q14511 834 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 DDB1Q16531 1140 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 ARPP21Q9UBL0 812 aaPredicted RBP18.75■□□□□ 0.59
SRF-201ENST00000265354 LIMA1Q9UHB6 759 aaKnown RBP18.75■□□□□ 0.59
SRF-201ENST00000265354 CAPN11Q9UMQ6 739 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 CAPN6Q9Y6Q1 641 aa18.75■□□□□ 0.59
SRF-201ENST00000265354 MAGOHP61326 146 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 RPS8P62241 208 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 ALS2CLQ60I27 953 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 TAB3Q8N5C8 712 aaPredicted RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 CCDC63Q8NA47 563 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 MAGOHBQ96A72 148 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 SWAP70Q9UH65 585 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 HNRNPH1P31943 449 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 LACTBP83111 547 aaPredicted RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.74■□□□□ 0.59
SRF-201ENST00000265354 ZIM3Q96PE6 472 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 ELAC2Q9BQ52 826 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 CD248Q9HCU0 757 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 INTS9Q9NV88 658 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 GEMIN8Q9NWZ8 242 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
SRF-201ENST00000265354 CDC42BPGQ6DT37 1551 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 PIK3C2BO00750 1634 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 RNF225M0QZC1 329 aaPredicted RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 DDAH1O94760 285 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 TRAPPC10P48553 1259 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 FKBP3Q00688 224 aaKnown RBP18.74■□□□□ 0.59
SRF-201ENST00000265354 TMEM60Q9H2L4 133 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 TBK1Q9UHD2 729 aa18.74■□□□□ 0.59
SRF-201ENST00000265354 DDX39AO00148 427 aaKnown RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 SESN3P58005 492 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 ATP2C1P98194 919 aaPredicted RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 ZRSR2Q15696 482 aaKnown RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 GPR101Q96P66 508 aaPredicted RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 RPL13P26373 211 aaKnown RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 STAT1P42224 750 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 HOOK3Q86VS8 718 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 MYCT1Q8N699 235 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 STK36Q9NRP7 1315 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 SFI1A8K8P3 1242 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 EIF3HO15372 352 aaKnown RBP eCLIP18.73■□□□□ 0.59
SRF-201ENST00000265354 GUCY2CP25092 1073 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 UAP1Q16222 522 aaPredicted RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 UBE2SQ16763 222 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 MSANTD4Q8NCY6 345 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 XDHP47989 1333 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 GFPT2O94808 682 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 PMS1P54277 932 aaKnown RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 TCP10Q12799 353 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 INTS8Q75QN2 995 aaKnown RBP18.73■□□□□ 0.59
SRF-201ENST00000265354 NKIRAS1Q9NYS0 192 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 BCS1LQ9Y276 419 aa18.73■□□□□ 0.59
SRF-201ENST00000265354 SP4Q02446 784 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 TBX2Q13207 712 aaPredicted RBP18.72■□□□□ 0.59
SRF-201ENST00000265354 EXOC3L4Q17RC7 722 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 PRR16Q569H4 304 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 CCT8L2Q96SF2 557 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 AMACRQ9UHK6 382 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 ZNF211Q13398 564 aaPredicted RBP18.72■□□□□ 0.59
SRF-201ENST00000265354 NLRP14Q86W24 1093 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 TRIM6Q9C030 488 aaPredicted RBP18.72■□□□□ 0.59
SRF-201ENST00000265354 TMEM260Q9NX78 707 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 CCDC160A6NGH7 325 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 CETN2P41208 172 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 SEL1L2Q5TEA6 688 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 ALKBH5Q6P6C2 394 aaKnown RBP18.72■□□□□ 0.59
SRF-201ENST00000265354 TPTE2Q6XPS3 522 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 PHLDB2Q86SQ0 1253 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 ADSSL1Q8N142 457 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 DDX12PQ92771 950 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 RNPC3Q96LT9 517 aaKnown RBP18.72■□□□□ 0.59
SRF-201ENST00000265354 SNX24Q9Y343 169 aa18.72■□□□□ 0.59
SRF-201ENST00000265354 KIDINS220Q9ULH0 1771 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 MYBL2P10244 700 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 FAM217BQ9NTX9 383 aaPredicted RBP18.71■□□□□ 0.59
SRF-201ENST00000265354 GSTO1P78417 241 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 MECOMQ03112 1051 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 ISCA1Q9BUE6 129 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 CCDC87Q9NVE4 849 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 MTUS1Q9ULD2 1270 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms