RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 HLFQ16534 295 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 NBPF9Q3BBW0 867 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 AGBL2Q5U5Z8 902 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 ISCUQ9H1K1 167 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 PPANQ9NQ55 473 aaKnown RBP13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 EHD2Q9NZN4 543 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 SERPING1P05155 500 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 STK4Q13043 487 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 NAB2Q15742 525 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 LACTB2Q53H82 288 aaPredicted RBP13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 CACNA2D3Q8IZS8 1091 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 DAGLBQ8NCG7 672 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 MTMR8Q96EF0 704 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 MS4A14Q96JA4 679 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 TRAPPC3O43617 180 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 GCFC2P16383 781 aaKnown RBP13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 PLCG1P19174 1290 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 BCAMP50895 628 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 LRRC63Q05C16 580 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 CYB5D1Q6P9G0 228 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 FOXR2Q6PJQ5 311 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 DNAJC10Q8IXB1 793 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 BAP1Q92560 729 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 N4BP2L2Q92802 583 aaPredicted RBP13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 ADAMTSL3P82987 1691 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 PP2D1A8MPX8 630 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 BUB1O43683 1085 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 GHRP10912 638 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 ERCC3P19447 782 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 HLTFQ14527 1009 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 IFI16Q16666 785 aaKnown RBP13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 TDRD12Q587J7 1177 aaKnown RBP13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 MEI1Q5TIA1 1274 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 TSG101Q99816 390 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 DDX20Q9UHI6 824 aaKnown RBP13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 SALL4Q9UJQ4 1053 aa13.65□□□□□ -0.22
CHMP2B-201ENST00000263780 DUOX1Q9NRD9 1551 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 A0A1B0GUA9 196 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 PVALEFA0A1B0GWK0 134 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 C5orf60A6NFR6 353 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 PALMO75781 387 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 MYBP10242 640 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 HPDP32754 393 aaPredicted RBP13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 GFPT1Q06210 699 aaPredicted RBP13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 CRYMQ14894 314 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 SFMBT2Q5VUG0 894 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 FUKQ8N0W3 1084 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 ANKRD13CQ8N6S4 541 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 MIEF2Q96C03 454 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 CALML4Q96GE6 196 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 PBKQ96KB5 322 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 PLIN2Q99541 437 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 RIOK1Q9BRS2 568 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 PCDHGC5Q9Y5F6 944 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 LRP5O75197 1615 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 ESYT3A0FGR9 886 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 PAEPP09466 180 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 IGHMBP2P38935 993 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 SLC1A4P43007 532 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 ANKRD20A8PQ5CZ79 823 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 GKAP1Q5VSY0 366 aaPredicted RBP13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 TOM1L2Q6ZVM7 507 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 GUF1Q8N442 669 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 EEF2KMTQ96G04 330 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 TMEM60Q9H2L4 133 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 SEMA6BQ9H3T3 888 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 CEP72Q9P209 647 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
CHMP2B-201ENST00000263780 OR52Z1P0C646 297 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 IL2RBP14784 551 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 PPP2R2AP63151 447 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 C10orf76Q5T2E6 689 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 SV2BQ7L1I2 683 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 CEP57Q86XR8 500 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 SEC16BQ96JE7 1060 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 INPP4AQ96PE3 977 aaPredicted RBP13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 LRRC27Q9C0I9 530 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 CNOT10Q9H9A5 744 aaKnown RBP13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 RIC8AQ9NPQ8 531 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 ABCF2Q9UG63 623 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 MYH3P11055 1940 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 M0R2N6 131 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 EPHB6O15197 1021 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 CALRP27797 417 aaKnown RBP13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 CTNNA1P35221 906 aaKnown RBP13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 HSD17B3P37058 310 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 XRCC4Q13426 336 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 FMNL3Q8IVF7 1028 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 PROM2Q8N271 834 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 CALR3Q96L12 384 aaKnown RBP13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 ATP6V0A4Q9HBG4 840 aa13.63□□□□□ -0.23
CHMP2B-201ENST00000263780 SLC12A6Q9UHW9 1150 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms