RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 DDX12PQ92771 950 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 CCDC51Q96ER9 411 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 RBM17Q96I25 401 aaKnown RBP14.15□□□□□ -0.14
TMEM260-201ENST00000261556 ARMT1Q9H993 441 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.15□□□□□ -0.14
TMEM260-201ENST00000261556 EHD2Q9NZN4 543 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 SPDYE5A6NIY4 337 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 SMNDC1O75940 238 aaKnown RBP eCLIP14.15□□□□□ -0.14
TMEM260-201ENST00000261556 BMP15O95972 392 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 CETN1Q12798 172 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 EDC3Q96F86 508 aaKnown RBP14.15□□□□□ -0.14
TMEM260-201ENST00000261556 PIDD1Q9HB75 910 aa14.15□□□□□ -0.14
TMEM260-201ENST00000261556 SAP30BPQ9UHR5 308 aaKnown RBP14.15□□□□□ -0.14
TMEM260-201ENST00000261556 GPAA1O43292 621 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 COQ9O75208 318 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 RTN2O75298 545 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 KRT13P13646 458 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 KIAA0753Q2KHM9 967 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 SCYL3Q8IZE3 742 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 SMCR8Q8TEV9 937 aaPredicted RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 HDAC7Q8WUI4 952 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 APPBP2Q92624 585 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 NDEL1Q9GZM8 345 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 GGA1Q9UJY5 639 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 ARHGAP31Q2M1Z3 1444 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 A0A1W2PQ27 194 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 A0A1W2PQ64 194 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 A0A1W2PQD8 194 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 E2F6O75461 281 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 MOCS3O95396 460 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 VIL1P09327 827 aaKnown RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 CARSP49589 748 aaKnown RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 RFX8Q6ZV50 586 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 BRAPQ7Z569 592 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 SIX5Q8N196 739 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 ZNF653Q96CK0 615 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 TAF1DQ9H5J8 278 aaPredicted RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 TMOD4Q9NZQ9 345 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 GJA3Q9Y6H8 435 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 TARSL2A2RTX5 802 aaKnown RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 TCP1P17987 556 aaKnown RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 RASSF7Q02833 373 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 KDM7AQ6ZMT4 941 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 TRPM8Q7Z2W7 1104 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 KBTBD3Q8NAB2 608 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 LPIN2Q92539 896 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
TMEM260-201ENST00000261556 ZFYVE16Q7Z3T8 1539 aa14.14□□□□□ -0.15
TMEM260-201ENST00000261556 NEURL1BA8MQ27 555 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 TBCAO75347 108 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 NQO1P15559 274 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 CALML3P27482 149 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 SH3BGRP55822 239 aaPredicted RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 PLS1Q14651 629 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 LRRC14Q15048 493 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 KCTD21Q4G0X4 260 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 P3H4Q92791 437 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 CHP1Q99653 195 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 C6orf50Q9HD87 102 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 KCND1Q9NSA2 647 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 CALM1P0DP23 149 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 CALM2P0DP24 149 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 CALM3P0DP25 149 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 GSTT1P30711 240 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 STAT6P42226 847 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 RPS8P62241 208 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 CBX3Q13185 183 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 TSEN2Q8NCE0 465 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 ERMNQ8TAM6 284 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 GDAP1Q8TB36 358 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 PYM1Q9BRP8 204 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 UTP6Q9NYH9 597 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 VIRMAQ69YN4 1812 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 NCK2O43639 380 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 MAB21L3Q8N8X9 362 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 SPATA4Q8NEY3 305 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 NMD3Q96D46 503 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 THRAP3Q9Y2W1 955 aaKnown RBP14.13□□□□□ -0.15
TMEM260-201ENST00000261556 KIAA0232Q92628 1395 aa14.13□□□□□ -0.15
TMEM260-201ENST00000261556 STX2P32856 288 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 PDE6CP51160 858 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 RTEL1Q9NZ71 1219 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 LRWD1Q9UFC0 647 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 FOXN1O15353 648 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 MAP3K7O43318 606 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 ALDH5A1P51649 535 aaPredicted RBP14.12□□□□□ -0.15
TMEM260-201ENST00000261556 EIF6P56537 245 aaKnown RBP14.12□□□□□ -0.15
TMEM260-201ENST00000261556 DHX9Q08211 1270 aaKnown RBP14.12□□□□□ -0.15
TMEM260-201ENST00000261556 SLC5A9Q2M3M2 681 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 DPP8Q6V1X1 898 aaPredicted RBP14.12□□□□□ -0.15
TMEM260-201ENST00000261556 GALNT15Q8N3T1 639 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 RAPGEF5Q92565 580 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 NKIRAS1Q9NYS0 192 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 ZBTB21Q9ULJ3 1066 aa14.12□□□□□ -0.15
TMEM260-201ENST00000261556 MLH1P40692 756 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms