RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 GLI1P08151 1106 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
PGBD1-201ENST00000259883 RNF187Q5TA31 235 aaPredicted RBP14.65□□□□□ -0.06
PGBD1-201ENST00000259883 FBXO33Q7Z6M2 555 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 DDX42Q86XP3 938 aaKnown RBP eCLIP14.65□□□□□ -0.06
PGBD1-201ENST00000259883 FAM133AQ8N9E0 248 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 LINC00116Q8NCU8 138 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 TBC1D5Q92609 795 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 DDX12PQ92771 950 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 CEP95Q96GE4 821 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 MMTAG2Q9BU76 263 aaKnown RBP14.65□□□□□ -0.06
PGBD1-201ENST00000259883 C6orf50Q9HD87 102 aa14.65□□□□□ -0.06
PGBD1-201ENST00000259883 FLT1P17948 1338 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 EBAG9O00559 213 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 PALMO75781 387 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 MEA1Q16626 185 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 TMED8Q6PL24 325 aaPredicted RBP14.64□□□□□ -0.07
PGBD1-201ENST00000259883 TRIM31Q9BZY9 425 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 HYOU1Q9Y4L1 999 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 ZC3H4Q9UPT8 1303 aaKnown RBP14.64□□□□□ -0.07
PGBD1-201ENST00000259883 GNPATO15228 680 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 TAL1P17542 331 aaPredicted RBP14.64□□□□□ -0.07
PGBD1-201ENST00000259883 MCM3P25205 808 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 SEC24CP53992 1094 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 KCNB1Q14721 858 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 GRM4Q14833 912 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 IQCEQ6IPM2 695 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 TEX11Q8IYF3 940 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 GPATCH11Q8N954 259 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 NUP58Q9BVL2 599 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 DUOX1Q9NRD9 1551 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 MPHOSPH10O00566 681 aaKnown RBP14.64□□□□□ -0.07
PGBD1-201ENST00000259883 ACTN1P12814 892 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 SNAP25P60880 206 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 TCERG1LQ5VWI1 586 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 HAUS3Q68CZ6 603 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 LARP4BQ92615 738 aaKnown RBP14.64□□□□□ -0.07
PGBD1-201ENST00000259883 ZIM3Q96PE6 472 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 AP1M1Q9BXS5 423 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 CCSER1Q9C0I3 900 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 MKRN1Q9UHC7 482 aaKnown RBP14.64□□□□□ -0.07
PGBD1-201ENST00000259883 BCS1LQ9Y276 419 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 FAM169AQ9Y6X4 670 aa14.64□□□□□ -0.07
PGBD1-201ENST00000259883 TMCO5BA8MYB1 307 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 MAGEA9P43362 315 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 AMPD3Q01432 767 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 GRB10Q13322 594 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 TTMPQ5BVD1 217 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 NAA35Q5VZE5 725 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 TRMT1LQ7Z2T5 733 aaKnown RBP14.63□□□□□ -0.07
PGBD1-201ENST00000259883 NOC3LQ8WTT2 800 aaKnown RBP14.63□□□□□ -0.07
PGBD1-201ENST00000259883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.63□□□□□ -0.07
PGBD1-201ENST00000259883 STIM2Q9P246 746 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 SHTN1A0MZ66 631 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 RASA1P20936 1047 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 BTDP43251 543 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 KIAA0753Q2KHM9 967 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 SLC30A10Q6XR72 485 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 CCDC170Q8IYT3 715 aa14.63□□□□□ -0.07
PGBD1-201ENST00000259883 E9PMD0 336 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 MEIS1O00470 390 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 NNTQ13423 1086 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 ECM1Q16610 540 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 CFAP58Q5T655 872 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 BLOC1S4Q9NUP1 217 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 KLRC1P26715 233 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 STAT3P40763 770 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 CDK8P49336 464 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 FAM98CQ17RN3 349 aaKnown RBP14.62□□□□□ -0.07
PGBD1-201ENST00000259883 TTBK2Q6IQ55 1244 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 NOX5Q96PH1 765 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 TLR10Q9BXR5 811 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 PPANQ9NQ55 473 aaKnown RBP14.62□□□□□ -0.07
PGBD1-201ENST00000259883 PLAGL2Q9UPG8 496 aa14.62□□□□□ -0.07
PGBD1-201ENST00000259883 KCNK3O14649 394 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 CORO7P57737 925 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 DCAF17Q5H9S7 520 aaPredicted RBP14.61□□□□□ -0.07
PGBD1-201ENST00000259883 DGKHQ86XP1 1220 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 AENQ8WTP8 325 aaKnown RBP14.61□□□□□ -0.07
PGBD1-201ENST00000259883 FAM196BA6NMK8 535 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 TUBBP07437 444 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 GNAQP50148 359 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 TUBB4BP68371 445 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 LLGL1Q15334 1064 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 HERC4Q5GLZ8 1057 aaPredicted RBP14.61□□□□□ -0.07
PGBD1-201ENST00000259883 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 AMIGO3Q86WK7 504 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 PNMA5Q96PV4 448 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 BCAS3Q9H6U6 928 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 ERLIN2O94905 339 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 AARSP49588 968 aaKnown RBP eCLIP14.61□□□□□ -0.07
PGBD1-201ENST00000259883 MAN2A1Q16706 1144 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 KRT25Q7Z3Z0 450 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 SIK3Q9Y2K2 1263 aa14.61□□□□□ -0.07
PGBD1-201ENST00000259883 FGRP09769 529 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 GNA11P29992 359 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms