RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SLC3A2P08195 630 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 NR1D1P20393 614 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 STX1BP61266 288 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 KRT83P78385 493 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 DDX54Q8TDD1 881 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 MMTAG2Q9BU76 263 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 SPEF1Q9Y4P9 236 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 CYP46A1Q9Y6A2 500 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 TSPOAP1O95153 1857 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 PDHBP11177 359 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 ACADSP16219 412 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 KCNA6P17658 529 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 CHKAP35790 457 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 TNNC1P63316 161 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 CCDC14Q49A88 953 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 USHBP1Q8N6Y0 703 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 TATDN2Q93075 761 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 VIPAS39Q9H9C1 493 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 NOTOA8MTQ0 251 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 CEP85Q6P2H3 762 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 RNF169Q8NCN4 708 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 SH2B1Q9NRF2 756 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 MBIPQ9NS73 344 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 ATAD3AQ9NVI7 634 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 WDR91A4D1P6 747 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 TIMM44O43615 452 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 S100A9P06702 114 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 EEF1DP29692 281 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 CYLC1P35663 651 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 NNTQ13423 1086 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 PPP2R3CQ969Q6 453 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 PRPF18Q99633 342 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 PLVAPQ9BX97 442 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 MRPL39Q9NYK5 338 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 TLDC2A0PJX2 215 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ATP5HO75947 161 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 GJA9P57773 515 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ARHGAP45Q92619 1136 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 INTS4Q96HW7 963 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 B3GALT6Q96L58 329 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 GLI2P10070 1586 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 RIMBP3CA6NJZ7 1639 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 RIMBP3BA6NNM3 1639 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 RIMBP3Q9UFD9 1639 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 TESPA1A2RU30 521 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 GOLGA8RI6L899 631 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ZSCAN9O15535 394 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 IGHDP01880 384 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 TRIM60Q495X7 471 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ADALQ6DHV7 355 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 MATN2O00339 956 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 IFNA8P32881 189 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 IRAK1P51617 712 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 R3HDM1Q15032 1099 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ZFAND2BQ8WV99 257 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 CNOT10Q9H9A5 744 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ZMYND8Q9ULU4 1186 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 CD2APQ9Y5K6 639 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 COMMD3-BMI1R4GMX3 469 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ATP7BP35670 1465 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 FNTAP49354 379 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 TOMM20Q15388 145 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 TRIM16LQ309B1 348 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 AGAP9Q5VTM2 703 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 FERMT3Q86UX7 667 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 MAGEC3Q8TD91 643 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 OSCP1Q8WVF1 389 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 SH3KBP1Q96B97 665 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 CENPTQ96BT3 561 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 CRNKL1Q9BZJ0 848 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 KCNK9Q9NPC2 374 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 ADGRB3O60242 1522 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 SBNO1A3KN83 1393 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 EME2A4GXA9 379 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 CAPN9O14815 690 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 APOA4P06727 396 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 KRT13P13646 458 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 TRPC1P48995 793 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 TMEM53Q6P2H8 277 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 CDR2LQ86X02 465 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 HDAC7Q8WUI4 952 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 C8orf76Q96K31 380 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 DDX23Q9BUQ8 820 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 VPS37BQ9H9H4 285 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 EPS15L1Q9UBC2 864 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 BCAP29Q9UHQ4 241 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 EXOC6BQ9Y2D4 811 aa7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 CAB39Q9Y376 341 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-201ENST00000257290 NUTM2BA6NNL0 878 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 NUTM2EB1AL46 878 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 NVLO15381 856 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 F13A1P00488 732 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 GSTT1P30711 240 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 ATP8B2P98198 1209 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 NUTM2AQ8IVF1 878 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 IFNL2Q8IZJ0 200 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 CFAP61Q8NHU2 1237 aa7.31□□□□□ -1.24
PDGFRA-201ENST00000257290 ANKRD2Q9GZV1 360 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms