RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 PDXDC1Q6P996 788 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 LRRC55Q6ZSA7 311 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 FAM107BQ9H098 131 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 XIRP1Q702N8 1843 aaKnown RBP14.84□□□□□ -0.03
H3F3B-201ENST00000254810 LSP1P33241 339 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 ITPK1Q13572 414 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 TMED8Q6PL24 325 aaPredicted RBP14.84□□□□□ -0.03
H3F3B-201ENST00000254810 FBXO33Q7Z6M2 555 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 RUBCNQ92622 972 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 PNMA5Q96PV4 448 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 RUFY1Q96T51 708 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 KANSL2Q9H9L4 492 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 CAPN7Q9Y6W3 813 aa14.84□□□□□ -0.03
H3F3B-201ENST00000254810 LOC102724159A0A0B4J2E5 919 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 PALMO75781 387 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 PWP2Q15269 919 aaKnown RBP14.83□□□□□ -0.04
H3F3B-201ENST00000254810 MAN2A1Q16706 1144 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 SBK1Q52WX2 424 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 PARP10Q53GL7 1025 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 PROCA1Q8NCQ7 364 aaPredicted RBP14.83□□□□□ -0.04
H3F3B-201ENST00000254810 NUDT12Q9BQG2 462 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 CUEDC2Q9H467 287 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 ATP8A2Q9NTI2 1148 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 ARPP21Q9UBL0 812 aaPredicted RBP14.83□□□□□ -0.04
H3F3B-201ENST00000254810 MYH14Q7Z406 1995 aaKnown RBP14.83□□□□□ -0.04
H3F3B-201ENST00000254810 NOL4O94818 638 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 PAFAH1B1P43034 410 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 CNNM4Q6P4Q7 775 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 SMIM5Q71RC9 77 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 TXNRD3Q86VQ6 643 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 KRT12Q99456 494 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 PACSIN1Q9BY11 444 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 TMEM260Q9NX78 707 aa14.83□□□□□ -0.04
H3F3B-201ENST00000254810 LAD1O00515 517 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 NAP1L1P55209 391 aaKnown RBP14.82□□□□□ -0.04
H3F3B-201ENST00000254810 NAA35Q5VZE5 725 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 KDM7AQ6ZMT4 941 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 KCNK18Q7Z418 384 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 DGKHQ86XP1 1220 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 CNPY4Q8N129 248 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 LAMB2P55268 1798 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 TXKP42681 527 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 CFAP58Q5T655 872 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 DNAAF5Q86Y56 855 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 PRPF38AQ8NAV1 312 aaKnown RBP14.82□□□□□ -0.04
H3F3B-201ENST00000254810 AK8Q96MA6 479 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 NOX5Q96PH1 765 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 MAGEF1Q9HAY2 307 aa14.82□□□□□ -0.04
H3F3B-201ENST00000254810 BSDC1Q9NW68 430 aaPredicted RBP14.82□□□□□ -0.04
H3F3B-201ENST00000254810 PALM3A6NDB9 673 aaPredicted RBP14.81□□□□□ -0.04
H3F3B-201ENST00000254810 EDIL3O43854 480 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 KLRC1P26715 233 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 SEMA3FQ13275 785 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 CFAP221Q4G0U5 840 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 COBLL1Q53SF7 1204 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 SWT1Q5T5J6 900 aaKnown RBP14.81□□□□□ -0.04
H3F3B-201ENST00000254810 C12orf60Q5U649 245 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 TMEM47Q9BQJ4 181 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 FGFBP2Q9BYJ0 223 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 NAPAP54920 295 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 HDLBPQ00341 1268 aaKnown RBP14.81□□□□□ -0.04
H3F3B-201ENST00000254810 TDRD12Q587J7 1177 aaKnown RBP14.81□□□□□ -0.04
H3F3B-201ENST00000254810 IFT20Q8IY31 132 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 TBCKQ8TEA7 893 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 CCDC47Q96A33 483 aaKnown RBP14.81□□□□□ -0.04
H3F3B-201ENST00000254810 ZMYND12Q9H0C1 365 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 BIN2Q9UBW5 565 aaPredicted RBP14.81□□□□□ -0.04
H3F3B-201ENST00000254810 STX8Q9UNK0 236 aa14.81□□□□□ -0.04
H3F3B-201ENST00000254810 SMCO2A6NFE2 343 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 RAD51CO43502 376 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 ENOX2Q16206 610 aaKnown RBP14.8□□□□□ -0.04
H3F3B-201ENST00000254810 PTPROQ16827 1216 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 ZNF473Q8WTR7 871 aaKnown RBP14.8□□□□□ -0.04
H3F3B-201ENST00000254810 ANKS1AQ92625 1134 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 ACSBG1Q96GR2 724 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 INPP4AQ96PE3 977 aaPredicted RBP14.8□□□□□ -0.04
H3F3B-201ENST00000254810 NCAPGQ9BPX3 1015 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 EPN3Q9H201 632 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 GOLPH3Q9H4A6 298 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 GEMIN8Q9NWZ8 242 aaKnown RBP14.8□□□□□ -0.04
H3F3B-201ENST00000254810 POTEMA6NI47 508 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 RBAK-RBAKDNI3L0D1 243 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 MEFVO15553 781 aaPredicted RBP14.8□□□□□ -0.04
H3F3B-201ENST00000254810 SLC37A4O43826 429 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 NR1D1P20393 614 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 MNAT1P51948 309 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 NONOQ15233 471 aaKnown RBP eCLIP14.8□□□□□ -0.044e-7■□□□□ 9.8
H3F3B-201ENST00000254810 GRIK5Q16478 980 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 ECM1Q16610 540 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 PTGISQ16647 500 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 CACNA2D4Q7Z3S7 1137 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 OR2W6PQ8NHA6 318 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 SH3RF3Q8TEJ3 882 aaPredicted RBP14.8□□□□□ -0.04
H3F3B-201ENST00000254810 GJA10Q969M2 543 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 CEP89Q96ST8 783 aa14.8□□□□□ -0.04
H3F3B-201ENST00000254810 KLRF2D3W0D1 207 aa14.79□□□□□ -0.04
H3F3B-201ENST00000254810 ECHS1P30084 290 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms