RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TBC1D8O95759 1140 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 NF2P35240 595 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 WDR78Q5VTH9 848 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 LRRC55Q6ZSA7 311 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 CCDC121Q6ZUS5 278 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 LENG9Q96B70 501 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 DHTKD1Q96HY7 919 aaPredicted RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 TAOK3Q9H2K8 898 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 LEMD3Q9Y2U8 911 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 RBAK-RBAKDNI3L0D1 243 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 COPB1P53618 953 aaKnown RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 SLMAPQ14BN4 828 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 TTC38Q5R3I4 469 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 MCTP2Q6DN12 878 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 ISM2Q6H9L7 571 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 ANKS4BQ8N8V4 417 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 MIGA1Q8NAN2 632 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 CAPS2Q9BXY5 557 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 EDEM3Q9BZQ6 932 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 VPS54Q9P1Q0 977 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 POLLQ9UGP5 575 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 FEZ2Q9UHY8 353 aaPredicted RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 FAM184BQ9ULE4 1060 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 GUCA1BQ9UMX6 200 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 SIK3Q9Y2K2 1263 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 JRKLQ9Y4A0 524 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 FKBP1AP62942 108 aaKnown RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 MTF1Q14872 753 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 CFAP221Q4G0U5 840 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 C3orf20Q8ND61 904 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 SH3RF3Q8TEJ3 882 aaPredicted RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 C7orf25Q9BPX7 421 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 ZKSCAN3Q9BRR0 538 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 MGAMO43451 1857 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 A0A1B0GUA9 196 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 USP17L12C9JPN9 530 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 USP17L21D6R901 530 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 IDEP14735 1019 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CYP7A1P22680 504 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 GBP1P32455 592 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 IFIT1BQ5T764 474 aaKnown RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 SPTY2D1Q68D10 685 aaPredicted RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 TADA2BQ86TJ2 420 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 KIAA0895Q8NCT3 520 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 NAP1L3Q99457 506 aaPredicted RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 PLCD4Q9BRC7 762 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 SYT11Q9BT88 431 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ZSWIM4Q9H7M6 989 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CYP3A7-CYP3A51PA0A087WV96 503 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 SRRM3A6NNA2 597 aaPredicted RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 KCNJ18B7U540 433 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 KIF1CO43896 1103 aaKnown RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 PRDM1O75626 825 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 GNA14O95837 355 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CYP3A7P24462 503 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CASP1P29466 404 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 SLC8A1P32418 973 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 GPSM2P81274 684 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ITIH3Q06033 890 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 KCNJ12Q14500 433 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CCDC96Q2M329 555 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ZNF658Q5TYW1 1059 aaPredicted RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 DTHD1Q6ZMT9 781 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ANKRD18AQ8IVF6 992 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 SLC35F6Q8N357 371 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 AK8Q96MA6 479 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 NOX5Q96PH1 765 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ANKRD2Q9GZV1 360 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 PCDHA4Q9UN74 947 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 NDUFAB1O14561 156 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 RNF40O75150 1001 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 FXR2P51116 673 aaKnown RBP eCLIP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 USP14P54578 494 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ADKP55263 362 aaKnown RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ST5P78524 1137 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ODF2Q5BJF6 829 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CAVIN4Q5BKX8 364 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CENPPQ6IPU0 288 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 C8orf74Q6P047 294 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CEP128Q6ZU80 1094 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 HAS1Q92839 578 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 MKL1Q969V6 931 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 DNAJC19Q96DA6 116 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CRAMP1Q96RY5 1269 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 FUT8Q9BYC5 575 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 FAM204AQ9H8W3 233 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 PLCB1Q9NQ66 1216 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 DDX4Q9NQI0 724 aaKnown RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CTNND2Q9UQB3 1225 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ZNF652Q9Y2D9 606 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 PPP1R12BO60237 982 aaPredicted RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 AFMP43652 599 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 HERVK_113P62684 666 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 ZNF827Q17R98 1081 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 NELFBQ8WX92 580 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 CALR3Q96L12 384 aaKnown RBP4.59□□□□□ -1.67
UBE4A-201ENST00000252108 TMEM47Q9BQJ4 181 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 STRA6Q9BX79 667 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 EHD4Q9H223 541 aa4.59□□□□□ -1.67
UBE4A-201ENST00000252108 DISC1Q9NRI5 854 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms