RNA–Protein interactions for RNA: ENST00000248451.7

PNKD-201, Transcript of PNKD, MBL domain containing, humanhuman

TSL 1 (best) BASIC

Gene PNKD, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-201ENST00000248451 CTAGE1Q96RT6 745 aa18.55■□□□□ 0.56
PNKD-201ENST00000248451 PIGSQ96S52 555 aa18.55■□□□□ 0.56
PNKD-201ENST00000248451 PDCD2LQ9BRP1 358 aa18.55■□□□□ 0.56
PNKD-201ENST00000248451 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
PNKD-201ENST00000248451 PCDHA1Q9Y5I3 950 aa18.55■□□□□ 0.56
PNKD-201ENST00000248451 RBM8AQ9Y5S9 174 aaKnown RBP18.55■□□□□ 0.56
PNKD-201ENST00000248451 TRIP12Q14669 1992 aaPredicted RBP18.55■□□□□ 0.56
PNKD-201ENST00000248451 EIF3JO75822 258 aaKnown RBP18.54■□□□□ 0.56
PNKD-201ENST00000248451 PTPN11Q06124 597 aaPredicted RBP18.54■□□□□ 0.56
PNKD-201ENST00000248451 WTAPQ15007 396 aa18.54■□□□□ 0.56
PNKD-201ENST00000248451 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
PNKD-201ENST00000248451 IL31RAQ8NI17 732 aa18.54■□□□□ 0.56
PNKD-201ENST00000248451 IGDCC4Q8TDY8 1250 aa18.54■□□□□ 0.56
PNKD-201ENST00000248451 EMID1Q96A84 441 aaPredicted RBP18.54■□□□□ 0.56
PNKD-201ENST00000248451 MAP3K20Q9NYL2 800 aaKnown RBP18.54■□□□□ 0.56
PNKD-201ENST00000248451 HOXA13P31271 388 aaPredicted RBP18.53■□□□□ 0.56
PNKD-201ENST00000248451 COL9A3Q14050 684 aaPredicted RBP18.53■□□□□ 0.56
PNKD-201ENST00000248451 TMEM67Q5HYA8 995 aa18.53■□□□□ 0.56
PNKD-201ENST00000248451 SESTD1Q86VW0 696 aa18.53■□□□□ 0.56
PNKD-201ENST00000248451 MTIF3Q9H2K0 278 aaKnown RBP18.53■□□□□ 0.56
PNKD-201ENST00000248451 YBX2Q9Y2T7 364 aaKnown RBP18.53■□□□□ 0.56
PNKD-201ENST00000248451 ERICH2A1L162 156 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 PITPNM1O00562 1244 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 PFKMP08237 780 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 PGM5Q15124 567 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 RAB30Q15771 203 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 RPUSD2Q8IZ73 545 aaKnown RBP18.52■□□□□ 0.56
PNKD-201ENST00000248451 SAMD3Q8N6K7 520 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 LSG1Q9H089 658 aaKnown RBP18.52■□□□□ 0.56
PNKD-201ENST00000248451 LY9Q9HBG7 655 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 CHD9Q3L8U1 2897 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 PTPRSQ13332 1948 aa18.52■□□□□ 0.56
PNKD-201ENST00000248451 FRMPD4Q14CM0 1322 aa18.51■□□□□ 0.55
PNKD-201ENST00000248451 HOXD8P13378 290 aaPredicted RBP18.51■□□□□ 0.55
PNKD-201ENST00000248451 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
PNKD-201ENST00000248451 GDF6Q6KF10 455 aaPredicted RBP18.51■□□□□ 0.55
PNKD-201ENST00000248451 VSIG10LQ86VR7 867 aa18.51■□□□□ 0.55
PNKD-201ENST00000248451 USP38Q8NB14 1042 aa18.51■□□□□ 0.55
PNKD-201ENST00000248451 NKX2-4Q9H2Z4 354 aa18.51■□□□□ 0.55
PNKD-201ENST00000248451 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
PNKD-201ENST00000248451 PRUNE2Q8WUY3 3088 aa18.51■□□□□ 0.55
PNKD-201ENST00000248451 PNMA6FA0A0J9YX94 578 aa18.5■□□□□ 0.55
PNKD-201ENST00000248451 F2P00734 622 aa18.5■□□□□ 0.55
PNKD-201ENST00000248451 IQCF3P0C7M6 154 aa18.5■□□□□ 0.55
PNKD-201ENST00000248451 DEFB128Q7Z7B8 93 aa18.5■□□□□ 0.55
PNKD-201ENST00000248451 CATIPQ7Z7H3 387 aa18.5■□□□□ 0.55
PNKD-201ENST00000248451 PPTC7Q8NI37 304 aa18.5■□□□□ 0.55
PNKD-201ENST00000248451 DHX38Q92620 1227 aaKnown RBP18.5■□□□□ 0.55
PNKD-201ENST00000248451 COL25A1Q9BXS0 654 aaPredicted RBP18.5■□□□□ 0.55
PNKD-201ENST00000248451 DOCK5Q9H7D0 1870 aa18.5■□□□□ 0.55
PNKD-201ENST00000248451 GCOM1H8Y6P7 765 aaPredicted RBP18.49■□□□□ 0.55
PNKD-201ENST00000248451 HAS3O00219 553 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 POLR2MP0CAP2 368 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 ZNF286BP0CG31 522 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 MYCLP12524 364 aaPredicted RBP18.49■□□□□ 0.55
PNKD-201ENST00000248451 CASTP20810 708 aaKnown RBP18.49■□□□□ 0.55
PNKD-201ENST00000248451 RFC2P35250 354 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 RABGGTBP53611 331 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 LAMC2Q13753 1193 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 PTGISQ16647 500 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 DGKDQ16760 1214 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 ZNF654Q8IZM8 581 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 GPKOWQ92917 476 aaPredicted RBP eCLIP18.49■□□□□ 0.55
PNKD-201ENST00000248451 MAP3K14Q99558 947 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 ESYT1Q9BSJ8 1104 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 MTA3Q9BTC8 594 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 SPZ1Q9BXG8 430 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 PRDM12Q9H4Q4 367 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 MSRAQ9UJ68 235 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 SLC4A7Q9Y6M7 1214 aa18.49■□□□□ 0.55
PNKD-201ENST00000248451 VCANP13611 3396 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 DDAH1O94760 285 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 UBA1P22314 1058 aaKnown RBP18.48■□□□□ 0.55
PNKD-201ENST00000248451 PSEN2P49810 448 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 CHMP4BP1P59074 171 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 SP2Q02086 613 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 RBL2Q08999 1139 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 TRAF1Q13077 416 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 ADGRE1Q14246 886 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 GPNMBQ14956 572 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 MYSM1Q5VVJ2 828 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 ZFP91Q96JP5 570 aaPredicted RBP18.48■□□□□ 0.55
PNKD-201ENST00000248451 HDAC6Q9UBN7 1215 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 GTF2IRD1Q9UHL9 959 aa18.48■□□□□ 0.55
PNKD-201ENST00000248451 CHD7Q9P2D1 2997 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 ZBBXA8MT70 800 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
PNKD-201ENST00000248451 SLC27A2O14975 620 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 PRC1O43663 620 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 MYOGP15173 224 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 ATP2A2P16615 1042 aaKnown RBP18.47■□□□□ 0.55
PNKD-201ENST00000248451 CCND2P30279 289 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 BFSP2Q13515 415 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 HSDL1Q3SXM5 330 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 CELF3Q5SZQ8 465 aaKnown RBP18.47■□□□□ 0.55
PNKD-201ENST00000248451 FCHSD1Q86WN1 690 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 DHX37Q8IY37 1157 aaKnown RBP18.47■□□□□ 0.55
PNKD-201ENST00000248451 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms