RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
SIN3B-201ENST00000248054 XRN1Q8IZH2 1706 aaKnown RBP17.32■□□□□ 0.36
SIN3B-201ENST00000248054 KRT5P13647 590 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 PPP4CP60510 307 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 ETF1P62495 437 aaKnown RBP17.32■□□□□ 0.36
SIN3B-201ENST00000248054 FKBP3Q00688 224 aaKnown RBP17.32■□□□□ 0.36
SIN3B-201ENST00000248054 IL25Q9H293 177 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 GH2P01242 217 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 SNX16P57768 344 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 IFT20Q8IY31 132 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 LRRC45Q96CN5 670 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 SAMD15Q9P1V8 674 aa17.32■□□□□ 0.36
SIN3B-201ENST00000248054 STAT1P42224 750 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 UBL4BQ8N7F7 174 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 DEPTORQ8TB45 409 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ZCCHC17Q9NP64 241 aaKnown RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 FEM1BQ9UK73 627 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 DAGLAQ9Y4D2 1042 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 FDX1P10109 184 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 PLCG1P19174 1290 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 SMARCA1P28370 1054 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 YWHAEP62258 255 aaKnown RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 CALCOCO2Q13137 446 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ARID5BQ14865 1188 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 MAN2A1Q16706 1144 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 FAM160B1Q5W0V3 765 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 CPLX4Q7Z7G2 160 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 SMCR8Q8TEV9 937 aaPredicted RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 EPSTI1Q96J88 318 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 NRBP2Q9NSY0 501 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ADD3Q9UEY8 706 aaKnown RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 BZW2Q9Y6E2 419 aaKnown RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ABCC6O95255 1503 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 MYCNP04198 464 aaPredicted RBP17.31■□□□□ 0.36
SIN3B-201ENST00000248054 INPP5BP32019 993 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ANTXR2P58335 489 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 LRRC63Q05C16 580 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 WHAMMP3Q1A5X7 153 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 K7ENM7 598 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ATP8B1O43520 1251 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 ALCAMQ13740 583 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 MAEAQ7L5Y9 396 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 PPP1R13BQ96KQ4 1090 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 RABEP2Q9H5N1 569 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 MYO1AQ9UBC5 1043 aa17.31■□□□□ 0.36
SIN3B-201ENST00000248054 EEF2P13639 858 aaKnown RBP17.3■□□□□ 0.36
SIN3B-201ENST00000248054 C8orf74Q6P047 294 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 EXOC8Q8IYI6 725 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 EXOC4Q96A65 974 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 PPP1R14CQ8TAE6 165 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 MLXIPQ9HAP2 919 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 DMP1Q13316 513 aaPredicted RBP17.3■□□□□ 0.36
SIN3B-201ENST00000248054 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 AOC3Q16853 763 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 FAM102BQ5T8I3 360 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 ZBTB8OSQ8IWT0 167 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 FLT1P17948 1338 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 ENTPD3O75355 529 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 LIG3P49916 1009 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 SARNPP82979 210 aaKnown RBP17.3■□□□□ 0.36
SIN3B-201ENST00000248054 SLC44A5Q8NCS7 719 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 FAM20AQ96MK3 541 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 JPH2Q9BR39 696 aaPredicted RBP17.3■□□□□ 0.36
SIN3B-201ENST00000248054 PDE11AQ9HCR9 933 aa17.3■□□□□ 0.36
SIN3B-201ENST00000248054 USP27XA6NNY8 438 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 NMT2O60551 498 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 CCND2P30279 289 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 C16orf86Q6ZW13 317 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
SIN3B-201ENST00000248054 ANKRD65E5RJM6 399 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 ATP2A2P16615 1042 aaKnown RBP17.29■□□□□ 0.36
SIN3B-201ENST00000248054 MAGEA9P43362 315 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 CCNA1P78396 465 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 ATP2C1P98194 919 aaPredicted RBP17.29■□□□□ 0.36
SIN3B-201ENST00000248054 TYW1BQ6NUM6 668 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 RUFY4Q6ZNE9 571 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 TDRD3Q9H7E2 651 aaKnown RBP17.29■□□□□ 0.36
SIN3B-201ENST00000248054 GJB4Q9NTQ9 266 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 ACTN4O43707 911 aaKnown RBP17.29■□□□□ 0.36
SIN3B-201ENST00000248054 ABCB11O95342 1321 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 GPR75-ASB3A0A0A6YYF3 556 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 HDLBPQ00341 1268 aaKnown RBP17.29■□□□□ 0.36
SIN3B-201ENST00000248054 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 GLG1Q92896 1179 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 GOLPH3LQ9H4A5 285 aa17.29■□□□□ 0.36
SIN3B-201ENST00000248054 TMEM110-MUSTN1A8MSY1 372 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 RPAINQ86UA6 219 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 IFT81Q8WYA0 676 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 PVALEFA0A1B0GWK0 134 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 UBE2SQ16763 222 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 ODR4Q5SWX8 454 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 UIMC1Q96RL1 719 aa17.28■□□□□ 0.36
SIN3B-201ENST00000248054 NCAPGQ9BPX3 1015 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms