RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 CDC37Q16543 378 aaPredicted RBP19.35■□□□□ 0.69
LRFN3-201ENST00000246529 MEA1Q16626 185 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 COBLL1Q53SF7 1204 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 DACT2Q5SW24 774 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 CC2D1AQ6P1N0 951 aaPredicted RBP19.35■□□□□ 0.69
LRFN3-201ENST00000246529 CCDC17Q96LX7 622 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 P2RX7Q99572 595 aaKnown RBP19.35■□□□□ 0.69
LRFN3-201ENST00000246529 FGFBP2Q9BYJ0 223 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 TBC1D7Q9P0N9 293 aa19.35■□□□□ 0.69
LRFN3-201ENST00000246529 RCCD1A6NED2 376 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 ENC1O14682 589 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 SASH3O75995 380 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 STAT3P40763 770 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 NHEJ1Q9H9Q4 299 aaPredicted RBP19.34■□□□□ 0.69
LRFN3-201ENST00000246529 NPHP3-ACAD11A0A0J9YXS1 232 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 E9PMD0 336 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 PPP1R2P41236 205 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 JAG1P78504 1218 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 FAM207AQ9NSI2 230 aaPredicted RBP19.34■□□□□ 0.69
LRFN3-201ENST00000246529 HDAC6Q9UBN7 1215 aa19.34■□□□□ 0.69
LRFN3-201ENST00000246529 PLEKP08567 350 aaPredicted RBP19.33■□□□□ 0.69
LRFN3-201ENST00000246529 CHRNA5P30532 468 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 ZBED6P86452 979 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 CYP27A1Q02318 531 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 RAD51AP2Q09MP3 1159 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 VWA3BQ502W6 1294 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 CCDC122Q5T0U0 273 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 FKBP15Q5T1M5 1219 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 NCAPH2Q6IBW4 605 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 GUF1Q8N442 669 aaKnown RBP19.33■□□□□ 0.69
LRFN3-201ENST00000246529 DNAJC19Q96DA6 116 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 ANKZF1Q9H8Y5 726 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 PI4KBQ9UBF8 816 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 PRDM4Q9UKN5 801 aa19.33■□□□□ 0.69
LRFN3-201ENST00000246529 EHHADHQ08426 723 aa19.33■□□□□ 0.68
LRFN3-201ENST00000246529 ERGIC2Q96RQ1 377 aa19.33■□□□□ 0.68
LRFN3-201ENST00000246529 NUP58Q9BVL2 599 aa19.33■□□□□ 0.68
LRFN3-201ENST00000246529 TRIM34Q9BYJ4 488 aa19.33■□□□□ 0.68
LRFN3-201ENST00000246529 LACRTQ9GZZ8 138 aa19.33■□□□□ 0.68
LRFN3-201ENST00000246529 NDST4Q9H3R1 872 aa19.33■□□□□ 0.68
LRFN3-201ENST00000246529 KIAA1024Q9UPX6 916 aa19.33■□□□□ 0.68
LRFN3-201ENST00000246529 POTEB3A0JP26 581 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 POTECB2RU33 542 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 TBC1D8O95759 1140 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 ICA1Q05084 483 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 COASYQ13057 564 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 AOC3Q16853 763 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 STRIP1Q5VSL9 837 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 POTEBQ6S5H4 581 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 CCDC155Q8N6L0 562 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 CEP112Q8N8E3 955 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 ANO3Q9BYT9 981 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 GTPBP4Q9BZE4 634 aaKnown RBP19.32■□□□□ 0.68
LRFN3-201ENST00000246529 TDRD3Q9H7E2 651 aaKnown RBP19.32■□□□□ 0.68
LRFN3-201ENST00000246529 KANSL2Q9H9L4 492 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 ZNHIT6Q9NWK9 470 aaKnown RBP19.32■□□□□ 0.68
LRFN3-201ENST00000246529 DUSP10Q9Y6W6 482 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 C10orf71Q711Q0 1435 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 MYH4Q9Y623 1939 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 AMPD2Q01433 879 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 USH1GQ495M9 461 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 LRRC55Q6ZSA7 311 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 KIAA1328Q86T90 577 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 MKL1Q969V6 931 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 DHX36Q9H2U1 1008 aaKnown RBP19.32■□□□□ 0.68
LRFN3-201ENST00000246529 MYO1AQ9UBC5 1043 aa19.32■□□□□ 0.68
LRFN3-201ENST00000246529 ZHX1Q9UKY1 873 aaPredicted RBP19.32■□□□□ 0.68
LRFN3-201ENST00000246529 GREB1LQ9C091 1923 aaPredicted RBP19.32■□□□□ 0.68
LRFN3-201ENST00000246529 MEIS2O14770 477 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 KRT26Q7Z3Y9 468 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 RETREG2Q8NC44 543 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 ZBTB9Q96C00 473 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 PNKPQ96T60 521 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 HAUS4Q9H6D7 363 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 NYAP2Q9P242 653 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 MYO6Q9UM54 1294 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 SIK3Q9Y2K2 1263 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 SIPA1L1O43166 1804 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 F5H6K3 240 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 RHOXF2BP0C7M4 288 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
LRFN3-201ENST00000246529 KLRC3Q07444 240 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 DCAF4Q8WV16 495 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 JAKMIP2Q96AA8 810 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 RHOXF2Q9BQY4 288 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 IDI2Q9BXS1 227 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 MMRN2Q9H8L6 949 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 PANK4Q9NVE7 773 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 MYH7BA7E2Y1 1941 aa19.31■□□□□ 0.68
LRFN3-201ENST00000246529 ATP1A1P05023 1023 aaKnown RBP19.3■□□□□ 0.68
LRFN3-201ENST00000246529 IKQ13123 557 aaPredicted RBP19.3■□□□□ 0.68
LRFN3-201ENST00000246529 RRP1BQ14684 758 aaKnown RBP19.3■□□□□ 0.68
LRFN3-201ENST00000246529 UTP14CQ5TAP6 766 aaKnown RBP19.3■□□□□ 0.68
LRFN3-201ENST00000246529 ZNF263O14978 683 aa19.3■□□□□ 0.68
LRFN3-201ENST00000246529 SRGAP2O75044 1071 aa19.3■□□□□ 0.68
LRFN3-201ENST00000246529 CYLC1P35663 651 aaPredicted RBP19.3■□□□□ 0.68
LRFN3-201ENST00000246529 GABPB1Q06547 395 aaPredicted RBP19.3■□□□□ 0.68
LRFN3-201ENST00000246529 TATDN1Q6P1N9 297 aa19.3■□□□□ 0.68
LRFN3-201ENST00000246529 NELFCDQ8IXH7 590 aa19.3■□□□□ 0.68
LRFN3-201ENST00000246529 SCN9AQ15858 1988 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms