RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 TSPY26PQ9H489 355 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 DDX19AQ9NUU7 478 aaKnown RBP14.6□□□□□ -0.07
HIF3A-201ENST00000244302 ASTN1O14525 1302 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 MSH4O15457 936 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 BMP15O95972 392 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 ZNF76P36508 570 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 FKBP1BP68106 108 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 FASTKD5Q7L8L6 764 aaKnown RBP14.6□□□□□ -0.07
HIF3A-201ENST00000244302 NCAPG2Q86XI2 1143 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 MTRQ99707 1265 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 FUCA2Q9BTY2 467 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 BCAS3Q9H6U6 928 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 CYP39A1Q9NYL5 469 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 ZKSCAN5Q9Y2L8 839 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 CYP3A7-CYP3A51PA0A087WV96 503 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 BIN1O00499 593 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 ATP2A1O14983 1001 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 MYCLP12524 364 aaPredicted RBP14.59□□□□□ -0.07
HIF3A-201ENST00000244302 ERCC3P19447 782 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 CYP3A7P24462 503 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 HSP90AA2PQ14568 343 aaPredicted RBP14.59□□□□□ -0.07
HIF3A-201ENST00000244302 ETNPPLQ8TBG4 499 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 MBOAT7Q96N66 472 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 RMDN3Q96TC7 470 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 WDR11Q9BZH6 1224 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 PORCNQ9H237 461 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 ACTN4O43707 911 aaKnown RBP14.59□□□□□ -0.07
HIF3A-201ENST00000244302 PGK2P07205 417 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 AFMP43652 599 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 RASAL3Q86YV0 1011 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 ANKRD13CQ8N6S4 541 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 KCNMB3Q9NPA1 279 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 FAM13BQ9NYF5 915 aa14.59□□□□□ -0.07
HIF3A-201ENST00000244302 LOC285556D6RIA3 1793 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 LETM1O95202 739 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-201ENST00000244302 CYP3A4P08684 503 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 FDX1P10109 184 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 CIITAP33076 1130 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 GTF2A2P52657 109 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 OAZ1P54368 228 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 MDM2Q00987 491 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-201ENST00000244302 UVSSAQ2YD98 709 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 NAALADL2Q58DX5 795 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 MCF2L2Q86YR7 1114 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 CNNM3Q8NE01 707 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 ACAD9Q9H845 621 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 TELO2Q9Y4R8 837 aa14.58□□□□□ -0.08
HIF3A-201ENST00000244302 MORC2Q9Y6X9 1032 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-201ENST00000244302 IGF2BP3O00425 579 aaKnown RBP eCLIP14.57□□□□□ -0.08
HIF3A-201ENST00000244302 MARCH6O60337 910 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 CETPP11597 493 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 LONP1P36776 959 aaKnown RBP14.57□□□□□ -0.08
HIF3A-201ENST00000244302 PRPHP41219 470 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 TRAF1Q13077 416 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 PGM5Q15124 567 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 E2F4Q16254 413 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 WDR78Q5VTH9 848 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 RBM43Q6ZSC3 357 aaKnown RBP14.57□□□□□ -0.08
HIF3A-201ENST00000244302 IGSF22Q8N9C0 903 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 PXMP2Q9NR77 195 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 MYPNQ86TC9 1320 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 RPTORQ8N122 1335 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 EML1O00423 815 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 SORBS3O60504 671 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 OSBPP22059 807 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 GHRHRQ02643 423 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 Q4G0T1 1027 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 CEP55Q53EZ4 464 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 KCNK18Q7Z418 384 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 PLA2G4DQ86XP0 818 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 RIOX2Q8IUF8 465 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 ANKRD35Q8N283 1001 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 PDCD2LQ9BRP1 358 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 BLZF1Q9H2G9 400 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 PCDHA12Q9UN75 941 aa14.57□□□□□ -0.08
HIF3A-201ENST00000244302 ATP9AO75110 1047 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 SPIRE1Q08AE8 756 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 ARHGEF16Q5VV41 709 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 RGMBQ6NW40 437 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 SMCR8Q8TEV9 937 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-201ENST00000244302 PNMA5Q96PV4 448 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 LRWD1Q9UFC0 647 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 ABT1Q9ULW3 272 aaKnown RBP14.56□□□□□ -0.08
HIF3A-201ENST00000244302 DDX39AO00148 427 aaKnown RBP14.56□□□□□ -0.08
HIF3A-201ENST00000244302 MEIS1O00470 390 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 LAD1O00515 517 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 RGS20O76081 388 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 UBA7P41226 1012 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 TYRO3Q06418 890 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
HIF3A-201ENST00000244302 CABP7Q86V35 215 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 PCDHA5Q9Y5H7 936 aa14.56□□□□□ -0.08
HIF3A-201ENST00000244302 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 CHMP2AO43633 222 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 GCFC2P16383 781 aaKnown RBP14.55□□□□□ -0.08
HIF3A-201ENST00000244302 PLCG1P19174 1290 aa14.55□□□□□ -0.08
HIF3A-201ENST00000244302 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms