RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 SV2BQ7L1I2 683 aa20.58■□□□□ 0.88
CHPF-201ENST00000243776 ZSCAN29Q8IWY8 852 aaPredicted RBP20.58■□□□□ 0.88
CHPF-201ENST00000243776 CALML4Q96GE6 196 aa20.58■□□□□ 0.88
CHPF-201ENST00000243776 CDK5RAP3Q96JB5 506 aa20.58■□□□□ 0.88
CHPF-201ENST00000243776 HEXIM1O94992 359 aaKnown RBP20.57■□□□□ 0.88
CHPF-201ENST00000243776 PCP11498 1178 aaKnown RBP20.57■□□□□ 0.88
CHPF-201ENST00000243776 EHHADHQ08426 723 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 CNNM4Q6P4Q7 775 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 TMED8Q6PL24 325 aaPredicted RBP20.57■□□□□ 0.88
CHPF-201ENST00000243776 KCNK18Q7Z418 384 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 FBXO33Q7Z6M2 555 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 NELFCDQ8IXH7 590 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 PIGSQ96S52 555 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 C7orf25Q9BPX7 421 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 ARAP2Q8WZ64 1704 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 PALMO75781 387 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 SEC24CP53992 1094 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 EPHB4P54760 987 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 C12orf60Q5U649 245 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 ZNF662Q6ZS27 426 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 PACSIN1Q9BY11 444 aa20.57■□□□□ 0.88
CHPF-201ENST00000243776 KCNQ2O43526 872 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 OPA1O60313 960 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 COA7Q96BR5 231 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 SH3GLB2Q9NR46 395 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 DCCP43146 1447 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 TDP2O95551 362 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 TCP1P17987 556 aaKnown RBP20.56■□□□□ 0.88
CHPF-201ENST00000243776 IBSPP21815 317 aaPredicted RBP20.56■□□□□ 0.88
CHPF-201ENST00000243776 HPDP32754 393 aaPredicted RBP20.56■□□□□ 0.88
CHPF-201ENST00000243776 GRB10Q13322 594 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 RNPC3Q96LT9 517 aaKnown RBP20.56■□□□□ 0.88
CHPF-201ENST00000243776 BLOC1S4Q9NUP1 217 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 FRMPD2Q68DX3 1309 aaPredicted RBP20.56■□□□□ 0.88
CHPF-201ENST00000243776 GOLGA8KD6RF30 607 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 EIF6P56537 245 aaKnown RBP20.56■□□□□ 0.88
CHPF-201ENST00000243776 POLR2FP61218 127 aaKnown RBP20.56■□□□□ 0.88
CHPF-201ENST00000243776 CFAP58Q5T655 872 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 CENPPQ6IPU0 288 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 NEK8Q86SG6 692 aa20.56■□□□□ 0.88
CHPF-201ENST00000243776 DGKHQ86XP1 1220 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 BAP1Q92560 729 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 NOX5Q96PH1 765 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 ZNF233A6NK53 670 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 SLC37A4O43826 429 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 INPP5BP32019 993 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
CHPF-201ENST00000243776 AMPD3Q01432 767 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 GPATCH11Q8N954 259 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 TBC1D5Q92609 795 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 FGFBP2Q9BYJ0 223 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 CAPN7Q9Y6W3 813 aa20.55■□□□□ 0.88
CHPF-201ENST00000243776 A0A1W2PQJ5 194 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 MYO1FO00160 1098 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 TRAF5O00463 557 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 BACH1O14867 736 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 MAN2A1Q16706 1144 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 MAATS1Q7Z4T9 603 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 OR2W6PQ8NHA6 318 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 KCNMA1Q12791 1236 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 CCDC40Q4G0X9 1142 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 PNMA5Q96PV4 448 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 SH3GL2Q99962 352 aa20.54■□□□□ 0.88
CHPF-201ENST00000243776 MYL1P05976 194 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 KLRC1P26715 233 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 ZHX3Q9H4I2 956 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 ADAMTS1Q9UHI8 967 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 TLR2O60603 784 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 SF3A3Q12874 501 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHPF-201ENST00000243776 RAPGEF1Q13905 1077 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 CFAP221Q4G0U5 840 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 RNF187Q5TA31 235 aaPredicted RBP20.53■□□□□ 0.88
CHPF-201ENST00000243776 PDXDC1Q6P996 788 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 DDX42Q86XP3 938 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHPF-201ENST00000243776 CLEC10AQ8IUN9 316 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 DDX12PQ92771 950 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 LSM14BQ9BX40 385 aaKnown RBP20.53■□□□□ 0.88
CHPF-201ENST00000243776 MNAT1P51948 309 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 CDK17Q00537 523 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 HLTFQ14527 1009 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHPF-201ENST00000243776 CALCRLQ16602 461 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 TBC1D9BQ66K14 1250 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 SNX29Q8TEQ0 813 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 CASKIN2Q8WXE0 1202 aa20.53■□□□□ 0.88
CHPF-201ENST00000243776 LARP4BQ92615 738 aaKnown RBP20.53■□□□□ 0.88
CHPF-201ENST00000243776 NPHP3-ACAD11A0A0J9YXS1 232 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 H0YHG0 523 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 GNAQP50148 359 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 HGSNATQ68CP4 663 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 EMBQ6PCB8 327 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 C6orf50Q9HD87 102 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 PALM3A6NDB9 673 aaPredicted RBP20.52■□□□□ 0.88
CHPF-201ENST00000243776 ECM1Q16610 540 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 FIGNQ5HY92 759 aa20.52■□□□□ 0.88
CHPF-201ENST00000243776 BCCIPQ9P287 314 aaKnown RBP eCLIP20.52■□□□□ 0.88
CHPF-201ENST00000243776 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.88
CHPF-201ENST00000243776 USP17L5A8MUK1 530 aa20.51■□□□□ 0.87
CHPF-201ENST00000243776 HNRNPH1P31943 449 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms