RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 STRCP1A6NGW2 1772 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
CXCR4-201ENST00000241393 A0A0D9SFI3 127 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 HTR3BO95264 441 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 PGRP06401 933 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 RPS6KB1P23443 525 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 MSNP26038 577 aaKnown RBP9.24□□□□□ -0.93
CXCR4-201ENST00000241393 GJB2P29033 226 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 YARSP54577 528 aaKnown RBP9.24□□□□□ -0.93
CXCR4-201ENST00000241393 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 CCDC83Q8IWF9 413 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 CHAMP1Q96JM3 812 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 HAUS7Q99871 368 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 SIL1Q9H173 461 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 DBNLQ9UJU6 430 aaKnown RBP9.24□□□□□ -0.93
CXCR4-201ENST00000241393 WDR17Q8IZU2 1322 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 UBR2Q8IWV8 1755 aa9.24□□□□□ -0.93
CXCR4-201ENST00000241393 A0A087WZG4 1122 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ZNF500O60304 480 aaPredicted RBP9.23□□□□□ -0.93
CXCR4-201ENST00000241393 TAF5LO75529 589 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 TIAF1O95411 115 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 LARGE1O95461 756 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 SELPP16109 830 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ASPAP45381 313 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 TERF1P54274 439 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ME3Q16798 604 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 HID1Q8IV36 788 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 RBBP8NLQ8NC74 664 aaPredicted RBP9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ANAPC16Q96DE5 110 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 CCDC39Q9UFE4 941 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 PPT2Q9UMR5 302 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ELP1O95163 1332 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 GRIN3BO60391 1043 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 IGSF3O75054 1194 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 GRK4P32298 578 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 CLCQ05315 142 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ST3GAL1Q11201 340 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 TMEM201Q5SNT2 666 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 ZBTB37Q5TC79 503 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 DHX38Q92620 1227 aaKnown RBP9.23□□□□□ -0.93
CXCR4-201ENST00000241393 FANCD2OSQ96PS1 177 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 GMIPQ9P107 970 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 PPP1R9AQ9ULJ8 1098 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 TPCN1Q9ULQ1 816 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 CNPY2Q9Y2B0 182 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 POLR3KQ9Y2Y1 108 aaPredicted RBP9.23□□□□□ -0.93
CXCR4-201ENST00000241393 CSADQ9Y600 493 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 SLC12A7Q9Y666 1083 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 PALLDQ8WX93 1383 aa9.23□□□□□ -0.93
CXCR4-201ENST00000241393 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 RNGTTO60942 597 aaKnown RBP9.22□□□□□ -0.93
CXCR4-201ENST00000241393 CIAO1O76071 339 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 CPA1P15085 419 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 IL15P40933 162 aaPredicted RBP9.22□□□□□ -0.93
CXCR4-201ENST00000241393 TFCP2Q12800 502 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 CHRNA2Q15822 529 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 MCMDC2Q4G0Z9 681 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 PPM1JQ5JR12 505 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 SHISA2Q6UWI4 295 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 KBTBD3Q8NAB2 608 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 CCDC191Q8NCU4 936 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 ZCRB1Q8TBF4 217 aaKnown RBP9.22□□□□□ -0.93
CXCR4-201ENST00000241393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.22□□□□□ -0.93
CXCR4-201ENST00000241393 TM9SF2Q99805 663 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 CWC25Q9NXE8 425 aaPredicted RBP9.22□□□□□ -0.93
CXCR4-201ENST00000241393 REV1Q9UBZ9 1251 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 STK17AQ9UEE5 414 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 PRKAG3Q9UGI9 489 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 ZKSCAN5Q9Y2L8 839 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 SPEF2Q9C093 1822 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
CXCR4-201ENST00000241393 TCHHQ07283 1943 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 OFD1O75665 1012 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 HMGB1P09429 215 aaKnown RBP9.21□□□□□ -0.93
CXCR4-201ENST00000241393 GIPRP48546 466 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 KRT85P78386 507 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 FOXO4P98177 505 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 RING1Q06587 406 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 RBL2Q08999 1139 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 LARP1BQ659C4 914 aaKnown RBP9.21□□□□□ -0.93
CXCR4-201ENST00000241393 Q6ZS46 218 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 ZNF589Q86UQ0 364 aaPredicted RBP9.21□□□□□ -0.93
CXCR4-201ENST00000241393 KLHDC4Q8TBB5 520 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 WFDC12Q8WWY7 111 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 CHMP4CQ96CF2 233 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 TRIM55Q9BYV6 548 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.93
CXCR4-201ENST00000241393 COL5A2P05997 1499 aaPredicted RBP9.21□□□□□ -0.94
CXCR4-201ENST00000241393 TPM2P07951 284 aa9.2□□□□□ -0.94
CXCR4-201ENST00000241393 CHMP4BP1P59074 171 aa9.2□□□□□ -0.94
CXCR4-201ENST00000241393 TOB2Q14106 344 aaPredicted RBP9.2□□□□□ -0.94
CXCR4-201ENST00000241393 SLC6A19Q695T7 634 aa9.2□□□□□ -0.94
CXCR4-201ENST00000241393 LMBR1LQ6UX01 489 aa9.2□□□□□ -0.94
CXCR4-201ENST00000241393 AGGF1Q8N302 714 aaeCLIP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms