RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ECHS1P30084 290 aa14.27□□□□□ -0.12
MSH2-201ENST00000233146 KLHDC4Q8TBB5 520 aa14.27□□□□□ -0.12
MSH2-201ENST00000233146 LRRC45Q96CN5 670 aa14.27□□□□□ -0.12
MSH2-201ENST00000233146 AIFM3Q96NN9 605 aa14.27□□□□□ -0.12
MSH2-201ENST00000233146 LRWD1Q9UFC0 647 aa14.27□□□□□ -0.12
MSH2-201ENST00000233146 CPLX1O14810 134 aa14.27□□□□□ -0.13
MSH2-201ENST00000233146 TPBGLP0DKB5 382 aa14.27□□□□□ -0.13
MSH2-201ENST00000233146 CYP11B2P19099 503 aa14.27□□□□□ -0.13
MSH2-201ENST00000233146 MTHFSDQ2M296 383 aaKnown RBP14.27□□□□□ -0.13
MSH2-201ENST00000233146 ATXN2LQ8WWM7 1075 aaKnown RBP14.27□□□□□ -0.13
MSH2-201ENST00000233146 MS4A14Q96JA4 679 aa14.27□□□□□ -0.13
MSH2-201ENST00000233146 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.13
MSH2-201ENST00000233146 TIPINQ9BVW5 301 aa14.27□□□□□ -0.13
MSH2-201ENST00000233146 MLXIPQ9HAP2 919 aa14.27□□□□□ -0.13
MSH2-201ENST00000233146 A0A1W2PQC6 194 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 KCNJ18B7U540 433 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 ZNF263O14978 683 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 MOCS3O95396 460 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 MYBP10242 640 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 CCDC15Q0P6D6 951 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 KCNJ12Q14500 433 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH2-201ENST00000233146 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 UCMAQ8WVF2 138 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 COG3Q96JB2 828 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 ISCUQ9H1K1 167 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 CTNND2Q9UQB3 1225 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 USP46P62068 366 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 SF3A3Q12874 501 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH2-201ENST00000233146 TSNAXIP1Q2TAA8 658 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 MB21D1Q8N884 522 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 STK32AQ8WU08 396 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 DNAJC9Q8WXX5 260 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 ALG1Q9BT22 464 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 TLR10Q9BXR5 811 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 CIDEBQ9UHD4 219 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 IQSEC3Q9UPP2 1182 aaPredicted RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 MYH1P12882 1939 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 A0A0G2JS52 829 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 SART1O43290 800 aaKnown RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 NLRP5P59047 1200 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 ZC3H6P61129 1189 aaKnown RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 LMNB2Q03252 620 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 TMED1Q13445 227 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 BTG3Q14201 252 aaPredicted RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 ZBTB8BQ8NAP8 495 aaPredicted RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 ASAP3Q8TDY4 903 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 LTV1Q96GA3 475 aaPredicted RBP14.26□□□□□ -0.13
MSH2-201ENST00000233146 THAP9Q9H5L6 903 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 RGPD1P0DJD0 1748 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
MSH2-201ENST00000233146 KLF18A0A0U1RQI7 1052 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 COBLO75128 1261 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 PEX11AO75192 247 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 OAS1P00973 400 aaKnown RBP14.25□□□□□ -0.13
MSH2-201ENST00000233146 MMEP08473 750 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 CBX3Q13185 183 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 SH3RF1Q7Z6J0 888 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 EXOC3L1Q86VI1 746 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 NLRP3Q96P20 1036 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 GSDMAQ96QA5 445 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 C4AP0C0L4 1744 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 C4BP0C0L5 1744 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 NCK2O43639 380 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 SHBGP04278 402 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 CHN1P15882 459 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 MCL1Q07820 350 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 SMC1BQ8NDV3 1235 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 KCNN1Q92952 543 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 KRT12Q99456 494 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 CCDC134Q9H6E4 229 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 RHBDL2Q9NX52 303 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 TMEM98Q9Y2Y6 226 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 PFDN1O60925 122 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 EPHA10Q5JZY3 1008 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 GIGYF2Q6Y7W6 1299 aaKnown RBP14.25□□□□□ -0.13
MSH2-201ENST00000233146 ARHGAP18Q8N392 663 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 ENDOVQ8N8Q3 282 aaKnown RBP14.25□□□□□ -0.13
MSH2-201ENST00000233146 ZNF507Q8TCN5 953 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 UNC45AQ9H3U1 944 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 CYP39A1Q9NYL5 469 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 CTTNBP2NLQ9P2B4 639 aa14.25□□□□□ -0.13
MSH2-201ENST00000233146 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
MSH2-201ENST00000233146 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
MSH2-201ENST00000233146 SNX3O60493 162 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 SAFBQ15424 915 aaKnown RBP eCLIP14.24□□□□□ -0.13
MSH2-201ENST00000233146 RNF10Q8N5U6 811 aaKnown RBP14.24□□□□□ -0.13
MSH2-201ENST00000233146 ATP8B4Q8TF62 1192 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 HAPLN3Q96S86 360 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 PCDH18Q9HCL0 1135 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 ZNHIT6Q9NWK9 470 aaKnown RBP14.24□□□□□ -0.13
MSH2-201ENST00000233146 PIK3C2BO00750 1634 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 RAPGEF3O95398 923 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 LSAMPQ13449 338 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 TMEM132AQ24JP5 1023 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms