RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 hCG_1642624A0A1W2PR95 340 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 CALM1P0DP23 149 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 CALM2P0DP24 149 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 CALM3P0DP25 149 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 CSF2RAP15509 400 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 GNAQP50148 359 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 ARHGAP1Q07960 439 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 NBPF20Q3BBV1 942 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 GPR153Q6NV75 609 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 TMEM199Q8N511 208 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 SAMD3Q8N6K7 520 aa16.44■□□□□ 0.22
GPN3-201ENST00000228827 TRMT13Q9NUP7 481 aaKnown RBP16.44■□□□□ 0.22
GPN3-201ENST00000228827 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
GPN3-201ENST00000228827 MMP3P08254 477 aa16.43■□□□□ 0.22
GPN3-201ENST00000228827 ACRP10323 421 aa16.43■□□□□ 0.22
GPN3-201ENST00000228827 CCND2P30279 289 aa16.43■□□□□ 0.22
GPN3-201ENST00000228827 CCL23P55773 120 aa16.43■□□□□ 0.22
GPN3-201ENST00000228827 PPIGQ13427 754 aaKnown RBP eCLIP16.43■□□□□ 0.22
GPN3-201ENST00000228827 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
GPN3-201ENST00000228827 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
GPN3-201ENST00000228827 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.22
GPN3-201ENST00000228827 SEZ6LQ9BYH1 1024 aa16.43■□□□□ 0.22
GPN3-201ENST00000228827 KPNA6O60684 536 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 RGS20O76081 388 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 EXOSC10Q01780 885 aaKnown RBP16.42■□□□□ 0.22
GPN3-201ENST00000228827 TMTC3Q6ZXV5 915 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
GPN3-201ENST00000228827 VSIG10LQ86VR7 867 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 SGMS1Q86VZ5 419 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 DHX37Q8IY37 1157 aaKnown RBP16.42■□□□□ 0.22
GPN3-201ENST00000228827 FAM161BQ96MY7 647 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 NOC4LQ9BVI4 516 aaKnown RBP16.42■□□□□ 0.22
GPN3-201ENST00000228827 CYP2C9P11712 490 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 CPA1P15085 419 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 SMARCA1P28370 1054 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 KRT32Q14532 448 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 APOA5Q6Q788 366 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 USP17L6PQ6QN14 398 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 C16orf59Q7L2K0 433 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
GPN3-201ENST00000228827 CUL5Q93034 780 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
GPN3-201ENST00000228827 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
GPN3-201ENST00000228827 TMEM240Q5SV17 173 aa16.41■□□□□ 0.22
GPN3-201ENST00000228827 MTMR10Q9NXD2 777 aa16.41■□□□□ 0.22
GPN3-201ENST00000228827 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
GPN3-201ENST00000228827 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
GPN3-201ENST00000228827 KLF18A0A0U1RQI7 1052 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 ZBTB43O43298 467 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 SUPT20HL2P0C7V6 817 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 CASTP20810 708 aaKnown RBP16.4■□□□□ 0.22
GPN3-201ENST00000228827 FGD1P98174 961 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 SP2Q02086 613 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 DGKDQ16760 1214 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 NFRKBQ6P4R8 1299 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 ZNF365Q70YC5 407 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 HEATR3Q7Z4Q2 680 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 KAT2BQ92831 832 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 SCLYQ96I15 445 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
GPN3-201ENST00000228827 WNT8AQ9H1J5 351 aa16.4■□□□□ 0.22
GPN3-201ENST00000228827 GOLGA8AA7E2F4 631 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 GOLGA8BA8MQT2 603 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 MEIS2O14770 477 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 GGPS1O95749 300 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 ZNF286BP0CG31 522 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 UBA1P22314 1058 aaKnown RBP16.39■□□□□ 0.21
GPN3-201ENST00000228827 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
GPN3-201ENST00000228827 SMAD3P84022 425 aaKnown RBP16.39■□□□□ 0.21
GPN3-201ENST00000228827 RTN1Q16799 776 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 CELF3Q5SZQ8 465 aaKnown RBP16.39■□□□□ 0.21
GPN3-201ENST00000228827 ZNF697Q5TEC3 545 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 EMID1Q96A84 441 aaPredicted RBP16.39■□□□□ 0.21
GPN3-201ENST00000228827 SPATA33Q96N06 139 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 PSTPIP2Q9H939 334 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 IL23AQ9NPF7 189 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 NOD1Q9Y239 953 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
GPN3-201ENST00000228827 HMGB1P09429 215 aaKnown RBP16.38■□□□□ 0.21
GPN3-201ENST00000228827 HSPA4P34932 840 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 UBE2SQ16763 222 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 MYSM1Q5VVJ2 828 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
GPN3-201ENST00000228827 KCNV1Q6PIU1 500 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 PPTC7Q8NI37 304 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
GPN3-201ENST00000228827 FRMPD4Q14CM0 1322 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 CNTNAP5Q8WYK1 1306 aa16.38■□□□□ 0.21
GPN3-201ENST00000228827 PIK3CDO00329 1044 aa16.37■□□□□ 0.21
GPN3-201ENST00000228827 PSEN2P49810 448 aa16.37■□□□□ 0.21
GPN3-201ENST00000228827 PTPN11Q06124 597 aaPredicted RBP16.37■□□□□ 0.21
GPN3-201ENST00000228827 HSDL1Q3SXM5 330 aa16.37■□□□□ 0.21
GPN3-201ENST00000228827 GNPTABQ3T906 1256 aa16.37■□□□□ 0.21
GPN3-201ENST00000228827 FAM109BQ6ICB4 259 aaPredicted RBP16.37■□□□□ 0.21
GPN3-201ENST00000228827 KCNB2Q92953 911 aa16.37■□□□□ 0.21
GPN3-201ENST00000228827 BCAS3Q9H6U6 928 aa16.37■□□□□ 0.21
GPN3-201ENST00000228827 MLXIPQ9HAP2 919 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms