RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MAGOHBQ96A72 148 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 RSRC1Q96IZ7 334 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 DDX47Q9H0S4 455 aaKnown RBP15.07■□□□□ 0
NFKB1-201ENST00000226574 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 SNX1Q13596 522 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 SRLQ86TD4 932 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 EFCAB13Q8IY85 973 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 UBL4BQ8N7F7 174 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 TTC16Q8NEE8 873 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 COG1Q8WTW3 980 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 LZTS2Q9BRK4 669 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 NT5C3AQ9H0P0 336 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 COL4A3BPQ9Y5P4 624 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 SMIM22K7EJ46 135 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 SASH3O75995 380 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 KRT15P19012 456 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
NFKB1-201ENST00000226574 STMN4Q9H169 189 aaPredicted RBP15.06■□□□□ 0
NFKB1-201ENST00000226574 MLXIPLQ9NP71 852 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 TBK1Q9UHD2 729 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 PLEKP08567 350 aaPredicted RBP15.06■□□□□ 0
NFKB1-201ENST00000226574 ACTN3Q08043 901 aaPredicted RBP15.06■□□□□ 0
NFKB1-201ENST00000226574 ALKBH5Q6P6C2 394 aaKnown RBP15.06■□□□□ 0
NFKB1-201ENST00000226574 OTUD6AQ7L8S5 288 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 TADA2BQ86TJ2 420 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 CLEC10AQ8IUN9 316 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 CCDC63Q8NA47 563 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 RETREG2Q8NC44 543 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 SPATA4Q8NEY3 305 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 SH3RF3Q8TEJ3 882 aaPredicted RBP15.06■□□□□ 0
NFKB1-201ENST00000226574 KIFC2Q96AC6 838 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 PCIF1Q9H4Z3 704 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 THAP9Q9H5L6 903 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 EMILIN3Q9NT22 766 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 CDC42BPGQ6DT37 1551 aa15.06■□□□□ 0
NFKB1-201ENST00000226574 ABCC12Q96J65 1359 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 PCK1P35558 622 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 MAGEA9P43362 315 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 CACNB3P54284 484 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 SETDB1Q15047 1291 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 KCTD19Q17RG1 926 aaPredicted RBP15.05■□□□□ 0
NFKB1-201ENST00000226574 FAM133BQ5BKY9 247 aaKnown RBP15.05■□□□□ 0
NFKB1-201ENST00000226574 FBXW10Q5XX13 1052 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 FAM178BQ8IXR5 827 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 OSBPL9Q96SU4 736 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 TMEM47Q9BQJ4 181 aa15.05■□□□□ 0
NFKB1-201ENST00000226574 ANKARQ7Z5J8 1434 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 LACTBP83111 547 aaPredicted RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 TRIP13Q15645 432 aaPredicted RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 PFKFB3Q16875 520 aaPredicted RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 TRIM68Q6AZZ1 485 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 HIBCHQ6NVY1 386 aaPredicted RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 TRIM65Q6PJ69 517 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 NUCKS1Q9H1E3 243 aaKnown RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 FEZ2Q9UHY8 353 aaPredicted RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 EIF4E1BA6NMX2 242 aaKnown RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L15C9J2P7 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L13C9JLJ4 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L11C9JVI0 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L18D6R9N7 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L22D6RA61 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L17D6RBQ6 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L19D6RCP7 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L20D6RJB6 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 E9PMD0 336 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L24Q0WX57 530 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 SF3B2Q13435 895 aaKnown RBP15.05■□□□□ -0
NFKB1-201ENST00000226574 USP17L6PQ6QN14 398 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 TMEM60Q9H2L4 133 aa15.05■□□□□ -0
NFKB1-201ENST00000226574 A0A1B0GUA9 196 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 RASGRP2Q7LDG7 609 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 OGFOD1Q8N543 542 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 PLAAQ9Y263 795 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 TCHHQ07283 1943 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 ZNF131P52739 623 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 ERVK-24P63145 666 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 PPP4R3AQ6IN85 833 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 NSMFQ6X4W1 530 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 SWAP70Q9UH65 585 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 NRXN1Q9ULB1 1477 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 TDP2O95551 362 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 DLATP10515 647 aaKnown RBP15.04■□□□□ -0
NFKB1-201ENST00000226574 ATP2C1P98194 919 aaPredicted RBP15.04■□□□□ -0
NFKB1-201ENST00000226574 ZNF211Q13398 564 aaPredicted RBP15.04■□□□□ -0
NFKB1-201ENST00000226574 LACRTQ9GZZ8 138 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 MINPP1Q9UNW1 487 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 STK36Q9NRP7 1315 aa15.04■□□□□ -0
NFKB1-201ENST00000226574 GAS7O60861 476 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 STX2P32856 288 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 PDE6BP35913 854 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 DPYDQ12882 1025 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 ARL6IP4Q66PJ3 421 aaKnown RBP15.03■□□□□ -0
NFKB1-201ENST00000226574 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 ARHGEF2Q92974 986 aaKnown RBP15.03■□□□□ -0
NFKB1-201ENST00000226574 INTS9Q9NV88 658 aaKnown RBP15.03■□□□□ -0
NFKB1-201ENST00000226574 A6NNZ2 444 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 USP17L5A8MUK1 530 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 HOXA13P31271 388 aaPredicted RBP15.03■□□□□ -0
NFKB1-201ENST00000226574 TUBB8Q3ZCM7 444 aa15.03■□□□□ -0
NFKB1-201ENST00000226574 EARS2Q5JPH6 523 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms