RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 COPS5Q92905 334 aa16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 MPHOSPH6Q99547 160 aaKnown RBP16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 XPNPEP3Q9NQH7 507 aa16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 GNEQ9Y223 722 aaKnown RBP16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 FRMPD3Q5JV73 1810 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 MYADML2A6NDP7 307 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 DUSP11O75319 330 aaKnown RBP16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 CCND2P30279 289 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 RGS19P49795 217 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 FOSBP53539 338 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 CCDC62Q6P9F0 684 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 UBE2Q1Q7Z7E8 422 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
SUPT4H1-201ENST00000225504 SYNRGQ9UMZ2 1314 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 SPDYE3A6NKU9 549 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 CTAGE5O15320 804 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 DYNC1LI2O43237 492 aaPredicted RBP16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 ADAMTS4O75173 837 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 TXNP10599 105 aaKnown RBP16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 LRRC41Q15345 812 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 LY6KQ17RY6 165 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 SCFD2Q8WU76 684 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 PHF20Q9BVI0 1012 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 ANO3Q9BYT9 981 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
SUPT4H1-201ENST00000225504 EDIL3O43854 480 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 FARP2O94887 1054 aaPredicted RBP16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 GNA11P29992 359 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 SP2Q02086 613 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 DUSP28Q4G0W2 176 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 REXO1Q8N1G1 1221 aaKnown RBP16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 CCDC148Q8NFR7 591 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 GLT8D2Q9H1C3 349 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 PCDHA4Q9UN74 947 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 KIAA1217Q5T5P2 1943 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 M0R2N6 131 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 ITGB5P18084 799 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 GJA9P57773 515 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 BEX3Q00994 111 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 ARRDC4Q8NCT1 418 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 KLHDC9Q8NEP7 349 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 OXER1Q8TDS5 423 aa16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 DDX41Q9UJV9 622 aaKnown RBP16.48■□□□□ 0.23
SUPT4H1-201ENST00000225504 SORBS3O60504 671 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 C6orf222P0C671 652 aaPredicted RBP16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 MCM2P49736 904 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 AP3B2Q13367 1082 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 CCSAPQ6IQ19 270 aaPredicted RBP16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 TEX2Q8IWB9 1127 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 ANKLE1Q8NAG6 615 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 CRYGNQ8WXF5 182 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 WASF1Q92558 559 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 UBIAD1Q9Y5Z9 338 aa16.47■□□□□ 0.23
SUPT4H1-201ENST00000225504 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 COL6A1P12109 1028 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 SREBF1P36956 1147 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 ARHGAP4P98171 946 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 GUCY1B3Q02153 619 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 TTLL4Q14679 1199 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 KCNA10Q16322 511 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 XRRA1Q6P2D8 792 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 DAGLBQ8NCG7 672 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 FERMT2Q96AC1 680 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 Q9Y3F1 56 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 MRVI1Q9Y6F6 885 aa16.46■□□□□ 0.23
SUPT4H1-201ENST00000225504 DNM1LO00429 736 aa16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 NKX3-2P78367 333 aa16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 ARHGAP1Q07960 439 aa16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 GNASQ5JWF2 1037 aa16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 KRT40Q6A162 431 aa16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 RNF180Q86T96 592 aa16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 TELO2Q9Y4R8 837 aa16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 MKI67P46013 3256 aaKnown RBP16.45■□□□□ 0.22
SUPT4H1-201ENST00000225504 ATP9AO75110 1047 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 STAM2O75886 525 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 CAPN2P17655 700 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 ICAM3P32942 547 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 FSCN1Q16658 493 aaKnown RBP16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 EARS2Q5JPH6 523 aaKnown RBP16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 GALNT17Q6IS24 598 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 NECAB2Q7Z6G3 386 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 FAM177A1Q8N128 213 aaPredicted RBP16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 OR6J1Q8NGC5 347 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 MXRA8Q9BRK3 442 aa16.44■□□□□ 0.22
SUPT4H1-201ENST00000225504 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms