RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 MCM3APO60318 1980 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 EIF3JO75822 258 aaKnown RBP14.99□□□□□ -0.01
TIMP1-201ENST00000218388 HMGCRP04035 888 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 GCFC2P16383 781 aaKnown RBP14.99□□□□□ -0.01
TIMP1-201ENST00000218388 CCL14Q16627 93 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 RILPL1Q5EBL4 403 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 NLRX1Q86UT6 975 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 FERMT3Q86UX7 667 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 VSIG10LQ86VR7 867 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 VTA1Q9NP79 307 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.99□□□□□ -0.01
TIMP1-201ENST00000218388 NRBP1Q9UHY1 535 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 PTPN22Q9Y2R2 807 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 ATP6V1DQ9Y5K8 247 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 LRRC37A2A6NM11 1700 aa14.99□□□□□ -0.01
TIMP1-201ENST00000218388 BRD1O95696 1058 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 F13A1P00488 732 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 GRK4P32298 578 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 SETQ01105 290 aaPredicted RBP14.98□□□□□ -0.01
TIMP1-201ENST00000218388 RESTQ13127 1097 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 LETM2Q2VYF4 491 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 MOXD1Q6UVY6 613 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 IL31RAQ8NI17 732 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 CRYGNQ8WXF5 182 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 TRIB2Q92519 343 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 CDHR1Q96JP9 859 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 ABHD16BQ9H3Z7 469 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 FLRT1Q9NZU1 646 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 PTCH2Q9Y6C5 1203 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 PCNTO95613 3336 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 KIAA1217Q5T5P2 1943 aa14.98□□□□□ -0.01
TIMP1-201ENST00000218388 CIITAP33076 1130 aa14.97□□□□□ -0.01
TIMP1-201ENST00000218388 DDIT3P35638 169 aa14.97□□□□□ -0.01
TIMP1-201ENST00000218388 ORC2Q13416 577 aaPredicted RBP14.97□□□□□ -0.01
TIMP1-201ENST00000218388 PKP1Q13835 747 aa14.97□□□□□ -0.01
TIMP1-201ENST00000218388 CEP55Q53EZ4 464 aa14.97□□□□□ -0.01
TIMP1-201ENST00000218388 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
TIMP1-201ENST00000218388 FOXD4L5Q5VV16 416 aaPredicted RBP14.97□□□□□ -0.01
TIMP1-201ENST00000218388 KCNV1Q6PIU1 500 aa14.97□□□□□ -0.01
TIMP1-201ENST00000218388 FBXO46Q6PJ61 603 aaPredicted RBP14.97□□□□□ -0.01
TIMP1-201ENST00000218388 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
TIMP1-201ENST00000218388 FOXD4L4Q8WXT5 416 aaPredicted RBP14.97□□□□□ -0.01
TIMP1-201ENST00000218388 GPRASP2Q96D09 838 aa14.97□□□□□ -0.01
TIMP1-201ENST00000218388 MYH15Q9Y2K3 1946 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 FAM205CA6NFA0 338 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 MAFGO15525 162 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 CCNT1O60563 726 aaKnown RBP14.96□□□□□ -0.01
TIMP1-201ENST00000218388 SNAI1O95863 264 aaPredicted RBP14.96□□□□□ -0.01
TIMP1-201ENST00000218388 ELNP15502 786 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 CYP2C19P33261 490 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.01
TIMP1-201ENST00000218388 ACVR2BQ13705 512 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 TTC38Q5R3I4 469 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 MYSM1Q5VVJ2 828 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 PPP4R3AQ6IN85 833 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 EEPD1Q7L9B9 569 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 FBXO16Q8IX29 292 aaPredicted RBP14.96□□□□□ -0.01
TIMP1-201ENST00000218388 ZNF396Q96N95 335 aaPredicted RBP14.96□□□□□ -0.01
TIMP1-201ENST00000218388 INPP4AQ96PE3 977 aaPredicted RBP14.96□□□□□ -0.01
TIMP1-201ENST00000218388 MXRA8Q9BRK3 442 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 RTEL1Q9NZ71 1219 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 ZHX1Q9UKY1 873 aaPredicted RBP14.96□□□□□ -0.01
TIMP1-201ENST00000218388 UBIAD1Q9Y5Z9 338 aa14.96□□□□□ -0.01
TIMP1-201ENST00000218388 CYP3A7-CYP3A51PA0A087WV96 503 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 FIBPO43427 364 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 BMP15O95972 392 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 IGHA2P01877 340 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 ATP2B1P20020 1258 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 CYP3A7P24462 503 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 MTMR1Q13613 665 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 SLC9C1Q4G0N8 1177 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 PRR16Q569H4 304 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 SEPT14Q6ZU15 432 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 PLA2G4DQ86XP0 818 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 SCFD2Q8WU76 684 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 JADE2Q9NQC1 790 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 DDX25Q9UHL0 483 aaKnown RBP14.95□□□□□ -0.02
TIMP1-201ENST00000218388 MRVI1Q9Y6F6 885 aa14.95□□□□□ -0.02
TIMP1-201ENST00000218388 FAM86B1E9PN63 330 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 MEIS1O00470 390 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 INHAP05111 366 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 FAM86B2P0C5J1 330 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 TGFB3P10600 412 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
TIMP1-201ENST00000218388 ICAM3P32942 547 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 TTLL4Q14679 1199 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 Q4G0T1 1027 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 ATL3Q6DD88 541 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 CEP131Q9UPN4 1083 aa14.94□□□□□ -0.02
TIMP1-201ENST00000218388 DDX49Q9Y6V7 483 aaKnown RBP14.94□□□□□ -0.02
TIMP1-201ENST00000218388 MARCH6O60337 910 aa14.93□□□□□ -0.02
TIMP1-201ENST00000218388 NEMFO60524 1076 aa14.93□□□□□ -0.02
TIMP1-201ENST00000218388 TDP2O95551 362 aa14.93□□□□□ -0.02
TIMP1-201ENST00000218388 CYBAP13498 195 aa14.93□□□□□ -0.02
TIMP1-201ENST00000218388 AKR1A1P14550 325 aa14.93□□□□□ -0.02
TIMP1-201ENST00000218388 ITGB5P18084 799 aa14.93□□□□□ -0.02
TIMP1-201ENST00000218388 MCM7P33993 719 aa14.93□□□□□ -0.02
TIMP1-201ENST00000218388 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
TIMP1-201ENST00000218388 GIMAP8Q8ND71 665 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms