RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 IGHA2P01877 340 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 USP11P51784 963 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 EEPD1Q7L9B9 569 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 NLRX1Q86UT6 975 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 IL31RAQ8NI17 732 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 MCOLN1Q9GZU1 580 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 CYP3A4P08684 503 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 U2AF2P26368 475 aaKnown RBP eCLIP22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 CACNB2Q08289 660 aaPredicted RBP22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 INF2Q27J81 1249 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 NEK8Q86SG6 692 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 FBXO16Q8IX29 292 aaPredicted RBP22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 CDHR1Q96JP9 859 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 HMX1Q9NP08 348 aaPredicted RBP22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 NOL7Q9UMY1 257 aaKnown RBP22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 HTTP42858 3142 aa22.99■■□□□ 1.27
RHBDD3-201ENST00000216085 CYBAP13498 195 aa22.98■■□□□ 1.27
RHBDD3-201ENST00000216085 MAP3K21Q5TCX8 1036 aa22.98■■□□□ 1.27
RHBDD3-201ENST00000216085 KCNV1Q6PIU1 500 aa22.98■■□□□ 1.27
RHBDD3-201ENST00000216085 SCFD2Q8WU76 684 aa22.98■■□□□ 1.27
RHBDD3-201ENST00000216085 TNFRSF25Q93038 417 aa22.98■■□□□ 1.27
RHBDD3-201ENST00000216085 MCM3APO60318 1980 aa22.97■■□□□ 1.27
RHBDD3-201ENST00000216085 CNGA1P29973 690 aa22.97■■□□□ 1.27
RHBDD3-201ENST00000216085 LRRC37A2A6NM11 1700 aa22.97■■□□□ 1.27
RHBDD3-201ENST00000216085 AKR1A1P14550 325 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 MRPS9P82933 396 aaKnown RBP22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 SETQ01105 290 aaPredicted RBP22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 TTLL4Q14679 1199 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 CEP55Q53EZ4 464 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 SEPT14Q6ZU15 432 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 BRAPQ7Z569 592 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 CRYGNQ8WXF5 182 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 ARMC5Q96C12 935 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 INPP4AQ96PE3 977 aaPredicted RBP22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 FAM184BQ9ULE4 1060 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 DDX49Q9Y6V7 483 aaKnown RBP22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 MSCO60682 206 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 GCFC2P16383 781 aaKnown RBP22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 TRIM32Q13049 653 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 PRAMEF19Q5SWL8 479 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 MOXD1Q6UVY6 613 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 GPRASP2Q96D09 838 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 RTEL1Q9NZ71 1219 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 MRVI1Q9Y6F6 885 aa22.96■■□□□ 1.27
RHBDD3-201ENST00000216085 MAFGO15525 162 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 FIBPO43427 364 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 ZNF865P0CJ78 1059 aaPredicted RBP22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 TRAPPC10P48553 1259 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 MTMR1Q13613 665 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 LETM2Q2VYF4 491 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 NIPA1Q7RTP0 329 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 MXRA8Q9BRK3 442 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 KATNBL1Q9H079 304 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 MTMR6Q9Y217 621 aa22.95■■□□□ 1.26
RHBDD3-201ENST00000216085 SEPT4O43236 478 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 TGFB3P10600 412 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 CIITAP33076 1130 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 CCDC144BQ3MJ40 725 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 IQSEC1Q6DN90 963 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 ZNF333Q96JL9 665 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 ZSCAN16Q9H4T2 348 aaPredicted RBP22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 UBIAD1Q9Y5Z9 338 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 KIF28PB7ZC32 967 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 WDR11Q9BZH6 1224 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 JADE2Q9NQC1 790 aa22.94■■□□□ 1.26
RHBDD3-201ENST00000216085 MYH7BA7E2Y1 1941 aa22.93■■□□□ 1.26
RHBDD3-201ENST00000216085 CCNT1O60563 726 aaKnown RBP22.93■■□□□ 1.26
RHBDD3-201ENST00000216085 RILPL1Q5EBL4 403 aa22.93■■□□□ 1.26
RHBDD3-201ENST00000216085 EARS2Q5JPH6 523 aaKnown RBP22.93■■□□□ 1.26
RHBDD3-201ENST00000216085 TAPT1Q6NXT6 567 aa22.93■■□□□ 1.26
RHBDD3-201ENST00000216085 RBM47A0AV96 593 aaKnown RBP22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 NKRFO15226 690 aaKnown RBP eCLIP22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 ITGB5P18084 799 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 CCND3P30281 292 aaPredicted RBP22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 ICAM3P32942 547 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 TNFAIP2Q03169 654 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 PRR16Q569H4 304 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 PPP4R3AQ6IN85 833 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 FERMT3Q86UX7 667 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 PLA2G4DQ86XP0 818 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 GIMAP8Q8ND71 665 aaPredicted RBP22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 TRPV1Q8NER1 839 aa22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 ZFP91Q96JP5 570 aaPredicted RBP22.92■■□□□ 1.26
RHBDD3-201ENST00000216085 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.92■■□□□ 1.261e-5■■■□□ 18
RHBDD3-201ENST00000216085 FAM205CA6NFA0 338 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 TXNP10599 105 aaKnown RBP22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 RARBP10826 455 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 CCL5P13501 91 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 ADCYAP1R1P41586 468 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 ORC2Q13416 577 aaPredicted RBP22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 RNF208Q9H0X6 261 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 PDGFCQ9NRA1 345 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 DDX20Q9UHI6 824 aaKnown RBP22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 DDX25Q9UHL0 483 aaKnown RBP22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 KIAA1217Q5T5P2 1943 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 CYP3A7-CYP3A51PA0A087WV96 503 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 FAM86B1E9PN63 330 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 MEIS1O00470 390 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 FAM86B2P0C5J1 330 aa22.91■■□□□ 1.26
RHBDD3-201ENST00000216085 ZSCAN22P10073 491 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms