RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SCYL1Q96KG9 808 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 Q9H521 79 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 INTS9Q9NV88 658 aaKnown RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 ASAP1Q9ULH1 1129 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 KAZNQ674X7 775 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 DHX36Q9H2U1 1008 aaKnown RBP14.75□□□□□ -0.05
SF3A1-201ENST00000215793 PCDHB4Q9Y5E5 795 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 PGRMC1O00264 195 aaKnown RBP14.75□□□□□ -0.05
SF3A1-201ENST00000215793 CCNA1P78396 465 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 ITKQ08881 620 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 CCDC93Q567U6 631 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 DCPSQ96C86 337 aaKnown RBP14.75□□□□□ -0.05
SF3A1-201ENST00000215793 PDE11AQ9HCR9 933 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 NEO1Q92859 1461 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 PHLPP2Q6ZVD8 1323 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 CFAP61Q8NHU2 1237 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 GBP5Q96PP8 586 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 TACO1Q9BSH4 297 aaKnown RBP14.75□□□□□ -0.05
SF3A1-201ENST00000215793 ADD3Q9UEY8 706 aaKnown RBP14.75□□□□□ -0.05
SF3A1-201ENST00000215793 RWDD2AQ9UIY3 292 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 M0R2C6 588 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 SH2B2O14492 632 aaPredicted RBP14.75□□□□□ -0.05
SF3A1-201ENST00000215793 PRPF3O43395 683 aaKnown RBP14.75□□□□□ -0.05
SF3A1-201ENST00000215793 KRT3P12035 628 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 CCNE1P24864 410 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 ZBED6P86452 979 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 PDE1BQ01064 536 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 RBL2Q08999 1139 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 PSMD2Q13200 908 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 ZNF653Q96CK0 615 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 SEPT10Q9P0V9 454 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 NUB1Q9Y5A7 615 aa14.75□□□□□ -0.05
SF3A1-201ENST00000215793 GOLGA8QA0A0J9YX86 632 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 GOLGA8OA6NCC3 632 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 SPDYE16A6NNV3 312 aaPredicted RBP14.74□□□□□ -0.05
SF3A1-201ENST00000215793 GOLGA8NF8WBI6 632 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 MAPK4P31152 587 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 RNASELQ05823 741 aaKnown RBP14.74□□□□□ -0.05
SF3A1-201ENST00000215793 PRPSAP1Q14558 356 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 C10orf76Q5T2E6 689 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 BBS5Q8N3I7 341 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 SEPT9Q9UHD8 586 aaPredicted RBP14.74□□□□□ -0.05
SF3A1-201ENST00000215793 PPEF1O14829 653 aaPredicted RBP14.74□□□□□ -0.05
SF3A1-201ENST00000215793 GPC4O75487 556 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 ABL1P00519 1130 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 TRIM42Q8IWZ5 723 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 RASGRP4Q8TDF6 673 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 MICAL1Q8TDZ2 1067 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 HVCN1Q96D96 273 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 ANKRD36BP1Q96IX9 119 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 RPS6KC1Q96S38 1066 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 MRPL47Q9HD33 250 aaKnown RBP14.74□□□□□ -0.05
SF3A1-201ENST00000215793 TTC36A6NLP5 189 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 ERVV-1B6SEH8 477 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 BAG5Q9UL15 447 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
SF3A1-201ENST00000215793 HEXIM1O94992 359 aaKnown RBP14.74□□□□□ -0.05
SF3A1-201ENST00000215793 BMP3P12645 472 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 PTPREP23469 700 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 ASPHQ12797 758 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 KMT5AQ9NQR1 393 aa14.74□□□□□ -0.05
SF3A1-201ENST00000215793 SPATA31E1Q6ZUB1 1445 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 ENC1O14682 589 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 KIF22Q14807 665 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 HAUS8Q9BT25 410 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 ANTXR1Q9H6X2 564 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 NRBP1Q9UHY1 535 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 MAN1B1Q9UKM7 699 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 ATP7BP35670 1465 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 SPICE1Q8N0Z3 855 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 SART1O43290 800 aaKnown RBP14.73□□□□□ -0.05
SF3A1-201ENST00000215793 MAP2K2P36507 400 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 C11orf57Q6ZUT1 292 aaPredicted RBP14.73□□□□□ -0.05
SF3A1-201ENST00000215793 ZNF710Q8N1W2 664 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 THAP9Q9H5L6 903 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 DYNLL1P63167 89 aaKnown RBP14.73□□□□□ -0.05
SF3A1-201ENST00000215793 ARL6IP4Q66PJ3 421 aaKnown RBP14.73□□□□□ -0.05
SF3A1-201ENST00000215793 TTBK2Q6IQ55 1244 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 CACTINQ8WUQ7 758 aaKnown RBP14.73□□□□□ -0.05
SF3A1-201ENST00000215793 PBKQ96KB5 322 aa14.73□□□□□ -0.05
SF3A1-201ENST00000215793 POC1B-GALNT4F8VUJ3 575 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 SRGAP2BP0DMP2 458 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 NR5A1Q13285 461 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 SESTD1Q86VW0 696 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 RFX6Q8HWS3 928 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 CCDC197Q8NCU1 140 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 OSBP2Q969R2 916 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 PIGSQ96S52 555 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 RIPOR2Q9Y4F9 1068 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 WDR17Q8IZU2 1322 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 CCDC151A5D8V7 595 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 INO80B-WBP1J3KQ70 363 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 SGK1O00141 431 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 SORBS3O60504 671 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 IGBP1P78318 339 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 PTPN12Q05209 780 aaKnown RBP14.72□□□□□ -0.05
SF3A1-201ENST00000215793 NLRP10Q86W26 655 aa14.72□□□□□ -0.05
SF3A1-201ENST00000215793 INO80BQ9C086 356 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms