RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TRIM31Q9BZY9 425 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 KBTBD4Q9NVX7 518 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 BCCIPQ9P287 314 aaKnown RBP eCLIP16.73■□□□□ 0.27
EFNB1-201ENST00000204961 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 DCCP43146 1447 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 CLIC2O15247 247 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 GNA11P29992 359 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 HOXA13P31271 388 aaPredicted RBP16.72■□□□□ 0.27
EFNB1-201ENST00000204961 GNAQP50148 359 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 GRB10Q13322 594 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 SELENOOQ9BVL4 669 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 LSM14BQ9BX40 385 aaKnown RBP16.72■□□□□ 0.27
EFNB1-201ENST00000204961 ECM29Q5VYK3 1845 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 GDF11O95390 407 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 TBC1D5Q92609 795 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 NYXQ9GZU5 481 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 LRRC10BA6NIK2 292 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 RHOBTB3O94955 611 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 SRGNP10124 158 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 MIIPQ5JXC2 388 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 ZFPM1Q8IX07 1006 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
EFNB1-201ENST00000204961 FLT1P17948 1338 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 USO1O60763 962 aaKnown RBP16.71■□□□□ 0.27
EFNB1-201ENST00000204961 EEF1GP26641 437 aaKnown RBP16.71■□□□□ 0.27
EFNB1-201ENST00000204961 TM4SF1P30408 202 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 ADCY7P51828 1080 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 USP14P54578 494 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 AMPD2Q01433 879 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 HLTFQ14527 1009 aaKnown RBP eCLIP16.71■□□□□ 0.27
EFNB1-201ENST00000204961 TMEM266Q2M3C6 531 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 CHORDC1Q9UHD1 332 aaPredicted RBP16.71■□□□□ 0.27
EFNB1-201ENST00000204961 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 PALM3A6NDB9 673 aaPredicted RBP16.71■□□□□ 0.27
EFNB1-201ENST00000204961 TACC1O75410 805 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 POTEIP0CG38 1075 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 POTEGQ6S5H5 508 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 POTEEQ6S8J3 1075 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 TRAPPC11Q7Z392 1133 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
EFNB1-201ENST00000204961 ZBED6P86452 979 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 NFIAQ12857 509 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 KRT25Q7Z3Z0 450 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 RUFY1Q96T51 708 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 DDX4Q9NQI0 724 aaKnown RBP16.7■□□□□ 0.26
EFNB1-201ENST00000204961 USP40Q9NVE5 1235 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 POLLQ9UGP5 575 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 MAP2K7O14733 419 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 ACTN2P35609 894 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 PRR16Q569H4 304 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 GJB7Q6PEY0 223 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 ELMO3Q96BJ8 720 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 MTMR8Q96EF0 704 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 PNMA5Q96PV4 448 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
EFNB1-201ENST00000204961 KRT14P02533 472 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 LDHCP07864 332 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 HPDP32754 393 aaPredicted RBP16.7■□□□□ 0.26
EFNB1-201ENST00000204961 AMPD3Q01432 767 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 PRPF4BQ13523 1007 aaKnown RBP16.7■□□□□ 0.26
EFNB1-201ENST00000204961 VWA3BQ502W6 1294 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 PCDHA12Q9UN75 941 aa16.7■□□□□ 0.26
EFNB1-201ENST00000204961 BICDL2A1A5D9 508 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 ATP2C2O75185 946 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 CCT5P48643 541 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 RTFDC1Q9BY42 306 aaPredicted RBP16.69■□□□□ 0.26
EFNB1-201ENST00000204961 THAP9Q9H5L6 903 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 CWC15Q9P013 229 aaKnown RBP16.69■□□□□ 0.26
EFNB1-201ENST00000204961 DDX25Q9UHL0 483 aaKnown RBP16.69■□□□□ 0.26
EFNB1-201ENST00000204961 NFU1Q9UMS0 254 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 RRP15Q9Y3B9 282 aaKnown RBP16.69■□□□□ 0.26
EFNB1-201ENST00000204961 PCDHB13Q9Y5F0 798 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 GOLGA6BA6NDN3 693 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 SEMA3EO15041 775 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 RCAN1P53805 252 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 GUCY2DQ02846 1103 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 GPBP1Q86WP2 473 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 ELOA2Q8IYF1 753 aaPredicted RBP16.69■□□□□ 0.26
EFNB1-201ENST00000204961 AFAP1L1Q8TED9 768 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 AP1M1Q9BXS5 423 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 RBM12Q9NTZ6 932 aaKnown RBP16.69■□□□□ 0.26
EFNB1-201ENST00000204961 PANK4Q9NVE7 773 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 LRP6O75581 1613 aa16.69■□□□□ 0.26
EFNB1-201ENST00000204961 RPS6KA4O75676 772 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 PRPF6O94906 941 aaKnown RBP16.68■□□□□ 0.26
EFNB1-201ENST00000204961 CLSTN1O94985 981 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 TRIM14Q14142 442 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 DDX42Q86XP3 938 aaKnown RBP eCLIP16.68■□□□□ 0.26
EFNB1-201ENST00000204961 ADGRF4Q8IZF3 695 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 KRT12Q99456 494 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 DNAJC7Q99615 494 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 PDHBP11177 359 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 PSMC6P62333 389 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 CYP2W1Q8TAV3 490 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms