RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 FCHSD1Q86WN1 690 aa32.43■■■□□ 2.78
PDCD2-201ENST00000167218 SNX14Q9Y5W7 946 aa32.43■■■□□ 2.78
PDCD2-201ENST00000167218 TLR3O15455 904 aaKnown RBP32.42■■■□□ 2.78
PDCD2-201ENST00000167218 MYL3P08590 195 aa32.42■■■□□ 2.78
PDCD2-201ENST00000167218 MYCLP12524 364 aaPredicted RBP32.42■■■□□ 2.78
PDCD2-201ENST00000167218 MTG1Q9BT17 334 aaPredicted RBP32.42■■■□□ 2.78
PDCD2-201ENST00000167218 SEC63Q9UGP8 760 aaKnown RBP32.42■■■□□ 2.78
PDCD2-201ENST00000167218 FRMPD4Q14CM0 1322 aa32.42■■■□□ 2.78
PDCD2-201ENST00000167218 GH1P01241 217 aa32.41■■■□□ 2.78
PDCD2-201ENST00000167218 HMGB1P09429 215 aaKnown RBP32.41■■■□□ 2.78
PDCD2-201ENST00000167218 BRDTQ58F21 947 aaPredicted RBP32.41■■■□□ 2.78
PDCD2-201ENST00000167218 CCDC82Q8N4S0 544 aa32.41■■■□□ 2.78
PDCD2-201ENST00000167218 hCG_1642624A0A1W2PR95 340 aa32.4■■■□□ 2.78
PDCD2-201ENST00000167218 MEIS2O14770 477 aa32.4■■■□□ 2.78
PDCD2-201ENST00000167218 KPNA6O60684 536 aa32.4■■■□□ 2.78
PDCD2-201ENST00000167218 CPA1P15085 419 aa32.4■■■□□ 2.78
PDCD2-201ENST00000167218 SYNE3Q6ZMZ3 975 aa32.4■■■□□ 2.78
PDCD2-201ENST00000167218 AFG1LQ8WV93 481 aa32.4■■■□□ 2.78
PDCD2-201ENST00000167218 B4GALT4O60513 344 aa32.39■■■□□ 2.78
PDCD2-201ENST00000167218 REC8O95072 547 aa32.39■■■□□ 2.78
PDCD2-201ENST00000167218 MFSD5Q6N075 450 aa32.39■■■□□ 2.78
PDCD2-201ENST00000167218 GPR153Q6NV75 609 aa32.39■■■□□ 2.78
PDCD2-201ENST00000167218 EMID1Q96A84 441 aaPredicted RBP32.39■■■□□ 2.78
PDCD2-201ENST00000167218 TRPV6Q9H1D0 765 aa32.39■■■□□ 2.78
PDCD2-201ENST00000167218 MRVI1Q9Y6F6 885 aa32.39■■■□□ 2.78
PDCD2-201ENST00000167218 PIK3CDO00329 1044 aa32.38■■■□□ 2.77
PDCD2-201ENST00000167218 ZBTB43O43298 467 aa32.38■■■□□ 2.77
PDCD2-201ENST00000167218 MMP3P08254 477 aa32.38■■■□□ 2.77
PDCD2-201ENST00000167218 FPGSQ05932 587 aa32.38■■■□□ 2.77
PDCD2-201ENST00000167218 FUT2Q10981 343 aa32.38■■■□□ 2.77
PDCD2-201ENST00000167218 USP17L6PQ6QN14 398 aa32.38■■■□□ 2.77
PDCD2-201ENST00000167218 ZFP91Q96JP5 570 aaPredicted RBP32.38■■■□□ 2.77
PDCD2-201ENST00000167218 ALDH8A1Q9H2A2 487 aaPredicted RBP32.38■■■□□ 2.77
PDCD2-201ENST00000167218 FAM217BQ9NTX9 383 aaPredicted RBP32.38■■■□□ 2.77
PDCD2-201ENST00000167218 CCND2P30279 289 aa32.37■■■□□ 2.77
PDCD2-201ENST00000167218 JAKMIP1Q96N16 626 aaKnown RBP32.37■■■□□ 2.77
PDCD2-201ENST00000167218 RBM28Q9NW13 759 aaKnown RBP32.37■■■□□ 2.77
PDCD2-201ENST00000167218 CNTNAP5Q8WYK1 1306 aa32.36■■■□□ 2.77
PDCD2-201ENST00000167218 MRPS9P82933 396 aaKnown RBP32.36■■■□□ 2.77
PDCD2-201ENST00000167218 RTN1Q16799 776 aa32.36■■■□□ 2.77
PDCD2-201ENST00000167218 NBPF20Q3BBV1 942 aa32.36■■■□□ 2.77
PDCD2-201ENST00000167218 PPP1R12CQ9BZL4 782 aa32.36■■■□□ 2.77
PDCD2-201ENST00000167218 KLF18A0A0U1RQI7 1052 aa32.35■■■□□ 2.77
PDCD2-201ENST00000167218 EPB41L2O43491 1005 aaKnown RBP32.35■■■□□ 2.77
PDCD2-201ENST00000167218 GPKOWQ92917 476 aaPredicted RBP eCLIP32.35■■■□□ 2.771e-6■□□□□ 11.3
PDCD2-201ENST00000167218 RCAN1P53805 252 aa32.34■■■□□ 2.77
PDCD2-201ENST00000167218 SP2Q02086 613 aa32.34■■■□□ 2.77
PDCD2-201ENST00000167218 KCNV1Q6PIU1 500 aa32.34■■■□□ 2.77
PDCD2-201ENST00000167218 SMARCC2Q8TAQ2 1214 aa32.34■■■□□ 2.77
PDCD2-201ENST00000167218 PPP1R13LQ8WUF5 828 aa32.34■■■□□ 2.77
PDCD2-201ENST00000167218 TRMT13Q9NUP7 481 aaKnown RBP32.34■■■□□ 2.77
PDCD2-201ENST00000167218 UMODL1Q5DID0 1318 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 TGFB3P10600 412 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 CDC27P30260 824 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 CYP2C18P33260 490 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 LAMC2Q13753 1193 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 MYSM1Q5VVJ2 828 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 NFRKBQ6P4R8 1299 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 BLOC1S2Q6QNY1 142 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 Q6ZUG5 572 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 C16orf59Q7L2K0 433 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 FBXL16Q8N461 479 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 KAT2BQ92831 832 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 CUL5Q93034 780 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 NOC4LQ9BVI4 516 aaKnown RBP32.33■■■□□ 2.77
PDCD2-201ENST00000167218 PSTPIP2Q9H939 334 aa32.33■■■□□ 2.77
PDCD2-201ENST00000167218 CSF2RAP15509 400 aa32.32■■■□□ 2.76
PDCD2-201ENST00000167218 CELF3Q5SZQ8 465 aaKnown RBP32.32■■■□□ 2.76
PDCD2-201ENST00000167218 DHX37Q8IY37 1157 aaKnown RBP32.32■■■□□ 2.76
PDCD2-201ENST00000167218 PPTC7Q8NI37 304 aa32.32■■■□□ 2.76
PDCD2-201ENST00000167218 INPP4AQ96PE3 977 aaPredicted RBP32.32■■■□□ 2.76
PDCD2-201ENST00000167218 AGXT2Q9BYV1 514 aa32.32■■■□□ 2.76
PDCD2-201ENST00000167218 HIPK3Q9H422 1215 aa32.32■■■□□ 2.76
PDCD2-201ENST00000167218 GOLGA8AA7E2F4 631 aa32.31■■■□□ 2.76
PDCD2-201ENST00000167218 GOLGA8BA8MQT2 603 aa32.31■■■□□ 2.76
PDCD2-201ENST00000167218 RPS6KB1P23443 525 aa32.31■■■□□ 2.76
PDCD2-201ENST00000167218 ICAM3P32942 547 aa32.31■■■□□ 2.76
PDCD2-201ENST00000167218 APOBRQ0VD83 1088 aa32.31■■■□□ 2.76
PDCD2-201ENST00000167218 USP26Q9BXU7 913 aa32.31■■■□□ 2.76
PDCD2-201ENST00000167218 STAM2O75886 525 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 HOXD8P13378 290 aaPredicted RBP32.3■■■□□ 2.76
PDCD2-201ENST00000167218 CASTP20810 708 aaKnown RBP32.3■■■□□ 2.76
PDCD2-201ENST00000167218 UBA1P22314 1058 aaKnown RBP32.3■■■□□ 2.76
PDCD2-201ENST00000167218 PTPN11Q06124 597 aaPredicted RBP32.3■■■□□ 2.76
PDCD2-201ENST00000167218 SEMA3FQ13275 785 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 DGKDQ16760 1214 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 WWC2Q6AWC2 1192 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 TYW1BQ6NUM6 668 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 HEATR3Q7Z4Q2 680 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 TMEM199Q8N511 208 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 BRF1Q92994 677 aa32.3■■■□□ 2.76
PDCD2-201ENST00000167218 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.3■■■□□ 2.76
PDCD2-201ENST00000167218 GGPS1O95749 300 aa32.29■■■□□ 2.76
PDCD2-201ENST00000167218 CENPBP07199 599 aaPredicted RBP32.29■■■□□ 2.76
PDCD2-201ENST00000167218 PPIGQ13427 754 aaKnown RBP eCLIP32.29■■■□□ 2.76
PDCD2-201ENST00000167218 HSDL1Q3SXM5 330 aa32.29■■■□□ 2.76
PDCD2-201ENST00000167218 PCNX4Q63HM2 1172 aa32.29■■■□□ 2.76
PDCD2-201ENST00000167218 WNT8AQ9H1J5 351 aa32.29■■■□□ 2.76
PDCD2-201ENST00000167218 BCAS3Q9H6U6 928 aa32.29■■■□□ 2.76
PDCD2-201ENST00000167218 RTEL1Q9NZ71 1219 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms