RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
PDZD4-201ENST00000164640 CUL5Q93034 780 aa16.56■□□□□ 0.24
PDZD4-201ENST00000164640 VAT1LQ9HCJ6 419 aa16.56■□□□□ 0.24
PDZD4-201ENST00000164640 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 ANP32DO95626 131 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 KLHDC7AQ5VTJ3 777 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 ENAHQ8N8S7 591 aaPredicted RBP16.55■□□□□ 0.24
PDZD4-201ENST00000164640 DHTKD1Q96HY7 919 aaPredicted RBP16.55■□□□□ 0.24
PDZD4-201ENST00000164640 TRIM37O94972 964 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 UPP2O95045 317 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 SCG2P13521 617 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 PLCG1P19174 1290 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 AMPD3Q01432 767 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 VWA3BQ502W6 1294 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 LPIN2Q92539 896 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 TMBIM4Q9HC24 238 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 AMACRQ9UHK6 382 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 PNMA2Q9UL42 364 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
PDZD4-201ENST00000164640 ATP6V1G2O95670 118 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 TSG101Q99816 390 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 LAMA4Q16363 1823 aa16.55■□□□□ 0.24
PDZD4-201ENST00000164640 PRPF3O43395 683 aaKnown RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 PDE8BO95263 885 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 MMEP08473 750 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 TECP42680 631 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 BCAMP50895 628 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 CDC37Q16543 378 aaPredicted RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 TTI2Q6NXR4 508 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 CCDC25Q86WR0 208 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 THEMISQ8N1K5 641 aaPredicted RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 CALML4Q96GE6 196 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 PLAGL2Q9UPG8 496 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 PCCAP05165 728 aaPredicted RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 KLRC1P26715 233 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 RASGRF1Q13972 1273 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 KCNB1Q14721 858 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 PKN1Q16512 942 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 SOGA3Q5TF21 947 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 KIF2BQ8N4N8 673 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 CHMP6Q96FZ7 201 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 CCDC189A1A4V9 331 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 DCDC2CA8MYV0 355 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 FGFR1OPO95684 399 aaKnown RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 IRX1P78414 480 aaPredicted RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 BLIDQ8IZY5 108 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 FAM133AQ8N9E0 248 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 RBM28Q9NW13 759 aaKnown RBP16.54■□□□□ 0.24
PDZD4-201ENST00000164640 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
PDZD4-201ENST00000164640 MAGEB6P1A0A0J9YX57 407 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDZD4-201ENST00000164640 CYP27B1O15528 508 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 CCNT1O60563 726 aaKnown RBP16.53■□□□□ 0.24
PDZD4-201ENST00000164640 KRT13P13646 458 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 IL17AQ16552 155 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 NBPF9Q3BBW0 867 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 GNPTABQ3T906 1256 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 NELFCDQ8IXH7 590 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 RNF217Q8TC41 542 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 PSMD1Q99460 953 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 UTP11Q9Y3A2 253 aaKnown RBP16.53■□□□□ 0.24
PDZD4-201ENST00000164640 MYH10P35580 1976 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 HEG1Q9ULI3 1381 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 TXKP42681 527 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 CNNM4Q6P4Q7 775 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
PDZD4-201ENST00000164640 INTS9Q9NV88 658 aaKnown RBP16.53■□□□□ 0.24
PDZD4-201ENST00000164640 TRAPPC3O43617 180 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 GNAT2P19087 354 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 PCK1P35558 622 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 KRT28Q7Z3Y7 464 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 KLHL29Q96CT2 875 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 NLRP3Q96P20 1036 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 DUSP9Q99956 384 aaKnown RBP16.52■□□□□ 0.24
PDZD4-201ENST00000164640 MLXIPLQ9NP71 852 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 MST1RQ04912 1400 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 ELF3P78545 371 aaPredicted RBP16.52■□□□□ 0.24
PDZD4-201ENST00000164640 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.24
PDZD4-201ENST00000164640 NOP53Q9NZM5 478 aaKnown RBP16.52■□□□□ 0.24
PDZD4-201ENST00000164640 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.24
PDZD4-201ENST00000164640 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.52■□□□□ 0.24
PDZD4-201ENST00000164640 MPHOSPH10O00566 681 aaKnown RBP16.52■□□□□ 0.23
PDZD4-201ENST00000164640 CALML3P27482 149 aa16.52■□□□□ 0.23
PDZD4-201ENST00000164640 PEX26Q7Z412 305 aa16.52■□□□□ 0.23
PDZD4-201ENST00000164640 LMBR1Q8WVP7 490 aa16.52■□□□□ 0.23
PDZD4-201ENST00000164640 CELF4Q9BZC1 486 aaKnown RBP16.52■□□□□ 0.23
PDZD4-201ENST00000164640 KCNK9Q9NPC2 374 aa16.52■□□□□ 0.23
PDZD4-201ENST00000164640 GDF3Q9NR23 364 aa16.52■□□□□ 0.23
PDZD4-201ENST00000164640 RGS16O15492 202 aaPredicted RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 SART1O43290 800 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 PRLRP16471 622 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 ZNF844Q08AG5 666 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 MTMR3Q13615 1198 aa16.51■□□□□ 0.23
PDZD4-201ENST00000164640 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
PDZD4-201ENST00000164640 HLFQ16534 295 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms