RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 BCS1LQ9Y276 419 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 MYH2Q9UKX2 1941 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
CTDP1-201ENST00000075430 TARSL2A2RTX5 802 aaKnown RBP18.48■□□□□ 0.55
CTDP1-201ENST00000075430 SMCO2A6NFE2 343 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 MECOMQ03112 1051 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 IFFO1Q0D2I5 559 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 PARP10Q53GL7 1025 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 CHADLQ6NUI6 762 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 CCDC121Q6ZUS5 278 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 TICAM2Q86XR7 235 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 MDM1Q8TC05 714 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 TNFRSF25Q93038 417 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 CABS1Q96KC9 395 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 PCDHA4Q9UN74 947 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 TCP1P17987 556 aaKnown RBP18.48■□□□□ 0.55
CTDP1-201ENST00000075430 CALML3P27482 149 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 GIMAP8Q8ND71 665 aaPredicted RBP18.48■□□□□ 0.55
CTDP1-201ENST00000075430 COA7Q96BR5 231 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 CAMTA2O94983 1202 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CALM1P0DP23 149 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CALM2P0DP24 149 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CALM3P0DP25 149 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 PDHBP11177 359 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CTNNA1P35221 906 aaKnown RBP18.47■□□□□ 0.55
CTDP1-201ENST00000075430 VWA3BQ502W6 1294 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CLEC10AQ8IUN9 316 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 FAM114A1Q8IWE2 563 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 ZNF473Q8WTR7 871 aaKnown RBP18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 NUP58Q9BVL2 599 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CRNKL1Q9BZJ0 848 aaKnown RBP18.47■□□□□ 0.55
CTDP1-201ENST00000075430 PHF20L1A8MW92 1017 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 USP8P40818 1118 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 MIIPQ5JXC2 388 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 CPLX4Q7Z7G2 160 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 KIAA0895Q8NCT3 520 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 DCP1AQ9NPI6 582 aaPredicted RBP18.47■□□□□ 0.55
CTDP1-201ENST00000075430 PCDHA6Q9UN73 950 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 NOVA2Q9UNW9 492 aaKnown RBP18.47■□□□□ 0.55
CTDP1-201ENST00000075430 PCDHA8Q9Y5H6 950 aa18.47■□□□□ 0.55
CTDP1-201ENST00000075430 RAD51CO43502 376 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 ACTN1P12814 892 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 SV2BQ7L1I2 683 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 CCDC170Q8IYT3 715 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 TBCKQ8TEA7 893 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 SELENOSQ9BQE4 189 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 A0A1W2PQC6 194 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 B4GALNT4Q76KP1 1039 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 NUDT12Q9BQG2 462 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 RIOK1Q9BRS2 568 aaKnown RBP18.46■□□□□ 0.55
CTDP1-201ENST00000075430 BAIAP2L1Q9UHR4 511 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
CTDP1-201ENST00000075430 PPP1R12BO60237 982 aaPredicted RBP18.46■□□□□ 0.55
CTDP1-201ENST00000075430 TSGA10Q9BZW7 698 aa18.46■□□□□ 0.55
CTDP1-201ENST00000075430 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 NPHP3-ACAD11A0A0J9YXS1 232 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 KLRF2D3W0D1 207 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 HIBADHP31937 336 aaKnown RBP18.45■□□□□ 0.54
CTDP1-201ENST00000075430 KLHL30Q0D2K2 578 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 PAK2Q13177 524 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 DCAF17Q5H9S7 520 aaPredicted RBP18.45■□□□□ 0.54
CTDP1-201ENST00000075430 PNMA8AQ86V59 439 aaPredicted RBP18.45■□□□□ 0.54
CTDP1-201ENST00000075430 NLRP14Q86W24 1093 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
CTDP1-201ENST00000075430 SNX29Q8TEQ0 813 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 SPAG5Q96R06 1193 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 CELF4Q9BZC1 486 aaKnown RBP18.45■□□□□ 0.54
CTDP1-201ENST00000075430 OR52Z1P0C646 297 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 IFNAR2P48551 515 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 KRT71Q3SY84 523 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 HAUS2Q9NVX0 235 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 MINPP1Q9UNW1 487 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 TRPM3Q9HCF6 1732 aaPredicted RBP18.45■□□□□ 0.54
CTDP1-201ENST00000075430 ANO9A1A5B4 782 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 MYMKA6NI61 221 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 CDC25CP30307 473 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 RPS8P62241 208 aaKnown RBP18.45■□□□□ 0.54
CTDP1-201ENST00000075430 KLHDC7AQ5VTJ3 777 aa18.45■□□□□ 0.54
CTDP1-201ENST00000075430 F8W031 263 aaPredicted RBP18.44■□□□□ 0.54
CTDP1-201ENST00000075430 OPLAHO14841 1288 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 RHOBTB3O94955 611 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 TBC1D9BQ66K14 1250 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 PPP1R37O75864 691 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 SLCO1A2P46721 670 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 ADCY1Q08828 1119 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 ZNF384Q8TF68 577 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 DHTKD1Q96HY7 919 aaPredicted RBP18.44■□□□□ 0.54
CTDP1-201ENST00000075430 GPCPD1Q9NPB8 672 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 A0A087X0T9 212 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 DCDC2CA8MYV0 355 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 CYTH3O43739 400 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 SKAP2O75563 359 aaPredicted RBP18.44■□□□□ 0.54
CTDP1-201ENST00000075430 TDP2O95551 362 aa18.44■□□□□ 0.54
CTDP1-201ENST00000075430 FAM228BP0C875 321 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms