RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 GFPT1Q06210 699 aaPredicted RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 ECM1Q16610 540 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 LZTS2Q9BRK4 669 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 DAGLAQ9Y4D2 1042 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 GPR75-ASB3A0A0A6YYF3 556 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 HNRNPLLQ8WVV9 542 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 DMGDHQ9UI17 866 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 USO1O60763 962 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 TUBB2AQ13885 445 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 NOC3LQ8WTT2 800 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDC27-201ENST00000066544 TUBB2BQ9BVA1 445 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 NUP58Q9BVL2 599 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 DDX4Q9NQI0 724 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 IRS2Q9Y4H2 1338 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 EIF3CLB5ME19 914 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 STAT3P40763 770 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 VAV2P52735 878 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 CCDC181Q5TID7 509 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDC27-201ENST00000066544 C10orf67Q8IYJ2 551 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 EIF3CQ99613 913 aaKnown RBP9.2□□□□□ -0.94
CDC27-201ENST00000066544 PCDHA13Q9Y5I0 950 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 G3V3G9 751 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 TACC1O75410 805 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 SERPINB2P05120 415 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 MEA1Q16626 185 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 TAF3Q5VWG9 929 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 GOLGA6L1Q8N7Z2 621 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 MTMR4Q9NYA4 1195 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 LCMT1Q9UIC8 334 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 KIAA1024Q9UPX6 916 aa9.2□□□□□ -0.94
CDC27-201ENST00000066544 TRIM66O15016 1216 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 RNF40O75150 1001 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 IKQ13123 557 aaPredicted RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 EXOC4Q96A65 974 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 CUEDC2Q9H467 287 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 SNED1Q8TER0 1413 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 MYL1P05976 194 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 SLC1A4P43007 532 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 HERC4Q5GLZ8 1057 aaPredicted RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 CENPPQ6IPU0 288 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 SLC30A10Q6XR72 485 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 ZSCAN29Q8IWY8 852 aaPredicted RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 MS4A14Q96JA4 679 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 LRRC1Q9BTT6 524 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 SALL4Q9UJQ4 1053 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 PACSIN2Q9UNF0 486 aaPredicted RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 MEIS1O00470 390 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 RAPGEF1Q13905 1077 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 UNC13DQ70J99 1090 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 ADGRF4Q8IZF3 695 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 EHBP1Q8NDI1 1231 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 LRRC4BQ9NT99 713 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 USP40Q9NVE5 1235 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 DDX25Q9UHL0 483 aaKnown RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 RSPH14Q9UHP6 348 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 POTEB3A0JP26 581 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 POTECB2RU33 542 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 POLR2FP61218 127 aaKnown RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 CKAP4Q07065 602 aaKnown RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 MAN2A1Q16706 1144 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 RC3H1Q5TC82 1133 aaKnown RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 TTC19Q6DKK2 380 aaPredicted RBP9.19□□□□□ -0.94
CDC27-201ENST00000066544 POTEBQ6S5H4 581 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 TBC1D16Q8TBP0 767 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 RAB34Q9BZG1 259 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 JMJD4Q9H9V9 463 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 PCDHA12Q9UN75 941 aa9.19□□□□□ -0.94
CDC27-201ENST00000066544 EDIL3O43854 480 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 PPP1R11O60927 126 aaPredicted RBP9.18□□□□□ -0.94
CDC27-201ENST00000066544 PAPD7Q5XG87 772 aaKnown RBP9.18□□□□□ -0.94
CDC27-201ENST00000066544 ERGIC2Q96RQ1 377 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 PCDHAC2Q9Y5I4 1007 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 SCN7AQ01118 1682 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 ESYT3A0FGR9 886 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 FTCDO95954 541 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 PLCG2P16885 1265 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 NFIAQ12857 509 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 FAM26FQ5R3K3 315 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 RAD54LQ92698 747 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 ACBD3Q9H3P7 528 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 PLAGL2Q9UPG8 496 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 GGCXP38435 758 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 RBM5P52756 815 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDC27-201ENST00000066544 CCDC170Q8IYT3 715 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 MYOCDQ8IZQ8 938 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 MTMR9Q96QG7 549 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 TSG101Q99816 390 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 LSM14BQ9BX40 385 aaKnown RBP9.18□□□□□ -0.94
CDC27-201ENST00000066544 GOLPH3Q9H4A6 298 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 USP21Q9UK80 565 aa9.18□□□□□ -0.94
CDC27-201ENST00000066544 SIK3Q9Y2K2 1263 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms