RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CNTNAP5Q8WYK1 1306 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 GCOM1H8Y6P7 765 aaPredicted RBP13.36□□□□□ -0.27
CHPF2-201ENST00000035307 WNT10BO00744 389 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 ASNSP08243 561 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 POLR2MP0CAP2 368 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 PLCG1P19174 1290 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 CDR1P51861 262 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
CHPF2-201ENST00000035307 TMTC1Q8IUR5 882 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
CHPF2-201ENST00000035307 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
CHPF2-201ENST00000035307 DOT1LQ8TEK3 1739 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 TLDC2A0PJX2 215 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
CHPF2-201ENST00000035307 GCNT3O95395 438 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 GYS2P54840 703 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 FMR1Q06787 632 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHPF2-201ENST00000035307 RCSD1Q6JBY9 416 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 FBXO38Q6PIJ6 1188 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 ADAT2Q7Z6V5 191 aaKnown RBP13.35□□□□□ -0.27
CHPF2-201ENST00000035307 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
CHPF2-201ENST00000035307 KLHL7Q8IXQ5 586 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 PPP1R16BQ96T49 567 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 TCHPQ9BT92 498 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHPF2-201ENST00000035307 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 PNMA6FA0A0J9YX94 578 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 GSTTP1A0A1W2PQM5 241 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 PEX10O60683 326 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 CTTNQ14247 550 aaKnown RBP13.35□□□□□ -0.27
CHPF2-201ENST00000035307 RNF187Q5TA31 235 aaPredicted RBP13.35□□□□□ -0.27
CHPF2-201ENST00000035307 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 MOB2Q70IA6 237 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 ZBTB5O15062 677 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 CYTH3O43739 400 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 KIAA0754O94854 1291 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 SHMT1P34896 483 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 ARHGEF16Q5VV41 709 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 VSTM4Q8IW00 320 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 EHMT1Q9H9B1 1298 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 FAM198AQ9UFP1 575 aa13.35□□□□□ -0.27
CHPF2-201ENST00000035307 KRT13P13646 458 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 OAS2P29728 719 aaKnown RBP13.34□□□□□ -0.27
CHPF2-201ENST00000035307 ARHGAP44Q17R89 818 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 HS2ST1Q7LGA3 356 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 AGBL1Q96MI9 1066 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 COL18A1P39060 1754 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 SETQ01105 290 aaPredicted RBP13.34□□□□□ -0.27
CHPF2-201ENST00000035307 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 ANO3Q9BYT9 981 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 IFIH1Q9BYX4 1025 aaKnown RBP13.34□□□□□ -0.27
CHPF2-201ENST00000035307 JMJD4Q9H9V9 463 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 WNT7AO00755 349 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 IKBKBO14920 756 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 DPH6Q7L8W6 267 aa13.34□□□□□ -0.27
CHPF2-201ENST00000035307 CNOT6LQ96LI5 555 aaKnown RBP13.34□□□□□ -0.27
CHPF2-201ENST00000035307 TOB1P50616 345 aaPredicted RBP13.33□□□□□ -0.27
CHPF2-201ENST00000035307 KSR1Q8IVT5 923 aa13.33□□□□□ -0.27
CHPF2-201ENST00000035307 ZDHHC15Q96MV8 337 aa13.33□□□□□ -0.27
CHPF2-201ENST00000035307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.33□□□□□ -0.27
CHPF2-201ENST00000035307 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.27
CHPF2-201ENST00000035307 ATRNO75882 1429 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 ABCB4P21439 1286 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 CYP2J2P51589 502 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 KRT31Q15323 416 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 PKN1Q16512 942 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 MYCT1Q8N699 235 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 GSDMAQ96QA5 445 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 LRRC27Q9C0I9 530 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 MRPL44Q9H9J2 332 aaKnown RBP13.33□□□□□ -0.28
CHPF2-201ENST00000035307 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 CETN3O15182 167 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 CKAP4Q07065 602 aaKnown RBP13.33□□□□□ -0.28
CHPF2-201ENST00000035307 CCDC25Q86WR0 208 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.28
CHPF2-201ENST00000035307 ALDH8A1Q9H2A2 487 aaPredicted RBP13.33□□□□□ -0.28
CHPF2-201ENST00000035307 ABCB11O95342 1321 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 E9PMD0 336 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 SECISBP2LQ93073 1101 aaKnown RBP13.32□□□□□ -0.28
CHPF2-201ENST00000035307 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
CHPF2-201ENST00000035307 CETN1Q12798 172 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 TIGD1Q96MW7 591 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 ANAPC4Q9UJX5 808 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 SERPINA10Q9UK55 444 aa13.32□□□□□ -0.28
CHPF2-201ENST00000035307 MYO6Q9UM54 1294 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms