RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RBM17Q96I25 401 aaKnown RBP13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 EYA3Q99504 573 aa13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 PCP11498 1178 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 LONP1P36776 959 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 PAK2Q13177 524 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 RESP18Q5W5W9 173 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 NELFCDQ8IXH7 590 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 SOWAHDA6NJG2 315 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 SLC20A2Q08357 652 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 TRAF1Q13077 416 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 DHX40Q8IX18 779 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 KAZALD1Q96I82 304 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 FAM167BQ9BTA0 163 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 LY75O60449 1722 aa13.33□□□□□ -0.28
TSPAN9-201ENST00000011898 ADCY7P51828 1080 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 TMEM232C9JQI7 657 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 TRAPPC10P48553 1259 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 TRIM31Q9BZY9 425 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 VCX3BQ9H321 246 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 VCX3AQ9NNX9 186 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 GGA1Q9UJY5 639 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 COL5A3P25940 1745 aaPredicted RBP13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 MMP10P09238 476 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 PDCLQ13371 301 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 LRRC45Q96CN5 670 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 AK9Q5TCS8 1911 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 ENC1O14682 589 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 CSF1RP07333 972 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 THOC1Q96FV9 657 aaKnown RBP13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 RPGRIP1Q96KN7 1286 aa13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
TSPAN9-201ENST00000011898 KIF28PB7ZC32 967 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 ZNF513Q8N8E2 541 aaPredicted RBP13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 SLC39A2Q9NP94 309 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 ZNF131P52739 623 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 KLHL7Q8IXQ5 586 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 MCUR1Q96AQ8 359 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 TUBGCP2Q9BSJ2 902 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 NEDD4P46934 1319 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 CREB3O43889 395 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 CASP1P29466 404 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 KLHL30Q0D2K2 578 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 CEP120Q8N960 986 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 TRIM58Q8NG06 486 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 PLVAPQ9BX97 442 aa13.31□□□□□ -0.28
TSPAN9-201ENST00000011898 PLS1Q14651 629 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 SHC4Q6S5L8 630 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 ANKRD13CQ8N6S4 541 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 ACRBPQ8NEB7 543 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 SLC16A10Q8TF71 515 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 ZMAT2Q96NC0 199 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 BPIFA3Q9BQP9 254 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 OPHN1O60890 802 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 GBP7Q8N8V2 638 aaPredicted RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.3□□□□□ -0.288e-7■□□□□ 9.5
TSPAN9-201ENST00000011898 PAGE5Q96GU1 130 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 MYH14Q7Z406 1995 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 PRPHP41219 470 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 SLC1A4P43007 532 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 PSMC4P43686 418 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 RFX5P48382 616 aaPredicted RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 SLC10A5Q5PT55 438 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 MFSD14BQ5SR56 506 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 HAUS3Q68CZ6 603 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 ARMC9Q7Z3E5 817 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 OGFOD1Q8N543 542 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 LY9Q9HBG7 655 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 NKIRAS1Q9NYS0 192 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 PPFIA2O75334 1257 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 SCP2P22307 547 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 HNRNPH1P31943 449 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 CFAP221Q4G0U5 840 aa13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 NAP1L4Q99733 375 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-201ENST00000011898 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 TMED1Q13445 227 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 SF3B3Q15393 1217 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 ARMCX5Q6P1M9 558 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 TBC1D1Q86TI0 1168 aaPredicted RBP13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 KCNB2Q92953 911 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 hCG_2014768A0A024R1R8 64 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 B4DLN1 442 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 EPB41P11171 864 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 MGARPQ8TDB4 240 aa13.29□□□□□ -0.28
TSPAN9-201ENST00000011898 ZBTB10Q96DT7 871 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms