RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 TCEANC2Q96MN5 208 aa28.78■■■□□ 2.2
TSR3-201ENST00000007390 KIAA1217Q5T5P2 1943 aa28.78■■■□□ 2.2
TSR3-201ENST00000007390 EPB41L2O43491 1005 aaKnown RBP28.77■■■□□ 2.2
TSR3-201ENST00000007390 MYL3P08590 195 aa28.77■■■□□ 2.2
TSR3-201ENST00000007390 LY6KQ17RY6 165 aa28.77■■■□□ 2.2
TSR3-201ENST00000007390 FCHSD1Q86WN1 690 aa28.77■■■□□ 2.2
TSR3-201ENST00000007390 IL31RAQ8NI17 732 aa28.77■■■□□ 2.2
TSR3-201ENST00000007390 RBM28Q9NW13 759 aaKnown RBP28.77■■■□□ 2.2
TSR3-201ENST00000007390 DDX41Q9UJV9 622 aaKnown RBP28.77■■■□□ 2.2
TSR3-201ENST00000007390 BRPF3Q9ULD4 1205 aa28.77■■■□□ 2.2
TSR3-201ENST00000007390 PIK3CDO00329 1044 aa28.76■■■□□ 2.19
TSR3-201ENST00000007390 RGS20O76081 388 aa28.76■■■□□ 2.19
TSR3-201ENST00000007390 RCAN1P53805 252 aa28.76■■■□□ 2.19
TSR3-201ENST00000007390 EMID1Q96A84 441 aaPredicted RBP28.76■■■□□ 2.19
TSR3-201ENST00000007390 SNX14Q9Y5W7 946 aa28.76■■■□□ 2.19
TSR3-201ENST00000007390 MRVI1Q9Y6F6 885 aa28.76■■■□□ 2.19
TSR3-201ENST00000007390 ZBTB43O43298 467 aa28.75■■■□□ 2.19
TSR3-201ENST00000007390 MYCLP12524 364 aaPredicted RBP28.75■■■□□ 2.19
TSR3-201ENST00000007390 CCND2P30279 289 aa28.75■■■□□ 2.19
TSR3-201ENST00000007390 FPGSQ05932 587 aa28.75■■■□□ 2.19
TSR3-201ENST00000007390 SHHQ15465 462 aa28.75■■■□□ 2.19
TSR3-201ENST00000007390 MFSD5Q6N075 450 aa28.75■■■□□ 2.19
TSR3-201ENST00000007390 KCNV1Q6PIU1 500 aa28.75■■■□□ 2.19
TSR3-201ENST00000007390 SCN10AQ9Y5Y9 1956 aa28.75■■■□□ 2.19
TSR3-201ENST00000007390 C9orf50Q5SZB4 431 aa28.74■■■□□ 2.19
TSR3-201ENST00000007390 AFG1LQ8WV93 481 aa28.74■■■□□ 2.19
TSR3-201ENST00000007390 JAKMIP1Q96N16 626 aaKnown RBP28.74■■■□□ 2.19
TSR3-201ENST00000007390 ALDH8A1Q9H2A2 487 aaPredicted RBP28.74■■■□□ 2.19
TSR3-201ENST00000007390 MEIS2O14770 477 aa28.73■■■□□ 2.19
TSR3-201ENST00000007390 B4GALT4O60513 344 aa28.73■■■□□ 2.19
TSR3-201ENST00000007390 MMP3P08254 477 aa28.73■■■□□ 2.19
TSR3-201ENST00000007390 EPHB4P54760 987 aa28.73■■■□□ 2.19
TSR3-201ENST00000007390 RTN1Q16799 776 aa28.73■■■□□ 2.19
TSR3-201ENST00000007390 CUL5Q93034 780 aa28.73■■■□□ 2.19
TSR3-201ENST00000007390 TRPV6Q9H1D0 765 aa28.73■■■□□ 2.19
TSR3-201ENST00000007390 CNTNAP5Q8WYK1 1306 aa28.72■■■□□ 2.19
TSR3-201ENST00000007390 KLF18A0A0U1RQI7 1052 aa28.72■■■□□ 2.19
TSR3-201ENST00000007390 STAM2O75886 525 aa28.72■■■□□ 2.19
TSR3-201ENST00000007390 TGFB3P10600 412 aa28.72■■■□□ 2.19
TSR3-201ENST00000007390 LAMC2Q13753 1193 aa28.72■■■□□ 2.19
TSR3-201ENST00000007390 CCDC82Q8N4S0 544 aa28.72■■■□□ 2.19
TSR3-201ENST00000007390 SMARCC2Q8TAQ2 1214 aa28.72■■■□□ 2.19
TSR3-201ENST00000007390 FUT2Q10981 343 aa28.71■■■□□ 2.19
TSR3-201ENST00000007390 NFRKBQ6P4R8 1299 aa28.71■■■□□ 2.19
TSR3-201ENST00000007390 USP17L6PQ6QN14 398 aa28.71■■■□□ 2.19
TSR3-201ENST00000007390 BLOC1S2Q6QNY1 142 aa28.71■■■□□ 2.19
TSR3-201ENST00000007390 FBXL16Q8N461 479 aa28.71■■■□□ 2.19
TSR3-201ENST00000007390 hCG_1642624A0A1W2PR95 340 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 GOLGA8AA7E2F4 631 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 GOLGA8BA8MQT2 603 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 CPA1P15085 419 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 FGD1P98174 961 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 NBPF20Q3BBV1 942 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 PPTC7Q8NI37 304 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 INPP4AQ96PE3 977 aaPredicted RBP28.7■■■□□ 2.18
TSR3-201ENST00000007390 PPP1R12CQ9BZL4 782 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 HIPK3Q9H422 1215 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 PSTPIP2Q9H939 334 aa28.7■■■□□ 2.18
TSR3-201ENST00000007390 SUPT20HL2P0C7V6 817 aa28.69■■■□□ 2.18
TSR3-201ENST00000007390 MRPS9P82933 396 aaKnown RBP28.69■■■□□ 2.18
TSR3-201ENST00000007390 PTPN11Q06124 597 aaPredicted RBP28.69■■■□□ 2.18
TSR3-201ENST00000007390 PPIGQ13427 754 aaKnown RBP eCLIP28.69■■■□□ 2.18
TSR3-201ENST00000007390 DGKDQ16760 1214 aa28.69■■■□□ 2.18
TSR3-201ENST00000007390 GNPTABQ3T906 1256 aa28.69■■■□□ 2.18
TSR3-201ENST00000007390 XRRA1Q6P2D8 792 aa28.69■■■□□ 2.18
TSR3-201ENST00000007390 DHX37Q8IY37 1157 aaKnown RBP28.69■■■□□ 2.18
TSR3-201ENST00000007390 TMEM199Q8N511 208 aa28.69■■■□□ 2.18
TSR3-201ENST00000007390 NOC4LQ9BVI4 516 aaKnown RBP28.69■■■□□ 2.18
TSR3-201ENST00000007390 FAM217BQ9NTX9 383 aaPredicted RBP28.69■■■□□ 2.18
TSR3-201ENST00000007390 HOXD8P13378 290 aaPredicted RBP28.68■■■□□ 2.18
TSR3-201ENST00000007390 CASTP20810 708 aaKnown RBP28.68■■■□□ 2.18
TSR3-201ENST00000007390 RPS6KB1P23443 525 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 PSMA5P28066 241 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 CELF3Q5SZQ8 465 aaKnown RBP28.68■■■□□ 2.18
TSR3-201ENST00000007390 MYSM1Q5VVJ2 828 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 PCNX4Q63HM2 1172 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 Q6ZUG5 572 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 HEATR3Q7Z4Q2 680 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 TEX2Q8IWB9 1127 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 AGXT2Q9BYV1 514 aa28.68■■■□□ 2.18
TSR3-201ENST00000007390 NID2Q14112 1375 aa28.67■■■□□ 2.18
TSR3-201ENST00000007390 UBA1P22314 1058 aaKnown RBP28.67■■■□□ 2.18
TSR3-201ENST00000007390 ICAM3P32942 547 aa28.67■■■□□ 2.18
TSR3-201ENST00000007390 CYP2C18P33260 490 aa28.67■■■□□ 2.18
TSR3-201ENST00000007390 KAT2BQ92831 832 aa28.67■■■□□ 2.18
TSR3-201ENST00000007390 TRMT13Q9NUP7 481 aaKnown RBP28.67■■■□□ 2.18
TSR3-201ENST00000007390 GGPS1O95749 300 aa28.66■■■□□ 2.18
TSR3-201ENST00000007390 CSF2RAP15509 400 aa28.66■■■□□ 2.18
TSR3-201ENST00000007390 CDC27P30260 824 aa28.66■■■□□ 2.18
TSR3-201ENST00000007390 SP2Q02086 613 aa28.66■■■□□ 2.18
TSR3-201ENST00000007390 WWC2Q6AWC2 1192 aa28.66■■■□□ 2.18
TSR3-201ENST00000007390 PPP1R18Q6NYC8 613 aa28.66■■■□□ 2.18
TSR3-201ENST00000007390 GPKOWQ92917 476 aaPredicted RBP eCLIP28.66■■■□□ 2.18
TSR3-201ENST00000007390 BRF1Q92994 677 aa28.66■■■□□ 2.18
TSR3-201ENST00000007390 ZFP91Q96JP5 570 aaPredicted RBP28.66■■■□□ 2.18
TSR3-201ENST00000007390 hCG_1984214I3L0E3 225 aa28.65■■■□□ 2.18
TSR3-201ENST00000007390 METAP2P50579 478 aaKnown RBP eCLIP28.65■■■□□ 2.18
TSR3-201ENST00000007390 APOBRQ0VD83 1088 aa28.65■■■□□ 2.18
TSR3-201ENST00000007390 FAM47CQ5HY64 1035 aa28.65■■■□□ 2.18
TSR3-201ENST00000007390 SESTD1Q86VW0 696 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms