RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Cog5Q8C0L8 829 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Mknk2Q8CDB0 459 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Lsm14bQ8CGC4 385 aaKnown RBP18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Mfap3lQ9D3X9 409 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Nr2e3Q9QXZ7 395 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Ccnyl1D3YUJ3 367 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 StrbpQ91WM1 672 aaKnown RBP18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Ccdc70Q9D9B0 223 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Gdf11Q9Z1W4 405 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Ddx17Q501J6 650 aaKnown RBP18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Dars2Q8BIP0 653 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Krt34Q9D646 392 aa18.6■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Ppp4r4Q8C0Y0 875 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Pomgnt1Q91X88 660 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Rmdn1Q9DCV4 305 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Tex13cD3YU32 604 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Cyth3O08967 399 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Gad1P48318 593 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Adcy7P51829 1099 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Ephb4P54761 987 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Rtel1Q0VGM9 1203 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Myo6Q64331 1265 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Pabpc4Q6PHQ9 660 aaKnown RBP18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Dcaf5Q80T85 946 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Mei1Q9D4I2 1268 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Cxcl11Q9JHH5 100 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Eef2kO08796 724 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Lnx1O70263 728 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Hcls1P49710 486 aaKnown RBP18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Ckap2Q3V1H1 664 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Nab2Q61127 525 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Sesn2P58043 480 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Map3k7Q62073 579 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Pprc1Q6NZN1 1644 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 A0A286YCQ6 122 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Dynll1P63168 89 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Trpc6Q61143 930 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Zrsr1Q64707 428 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 MarsQ68FL6 902 aaKnown RBP18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 F13a1Q8BH61 732 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Arhgap29Q8CGF1 1266 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Cttnbp2nlQ99LJ0 638 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Tspan17Q9D7W4 270 aa18.59■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Nup160Q9Z0W3 1402 aaKnown RBP18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 MlklQ9D2Y4 472 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Spata17Q9D552 379 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Nck2O55033 380 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 HpdP49429 393 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Stx1bP61264 288 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Satb1Q60611 764 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Klhl38Q8BSF5 581 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Ddx19bQ8BZY3 494 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Dhx30Q99PU8 1217 aaKnown RBP18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 Hdac6Q9Z2V5 1149 aa18.58■□□□□ 0.57
Ptpre-207ENSMUST00000211140 DnttP09838 530 aa18.58■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Tcp11l2Q8K1H7 517 aa18.58■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Pfdn6Q03958 127 aa18.58■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Hdac4Q6NZM9 1076 aa18.58■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Ppp2r5dQ91V89 594 aa18.58■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Ndst4Q9EQW8 872 aa18.58■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Lrriq4A6H6A4 596 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Dynlt1P51807 113 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Actn1Q7TPR4 892 aaKnown RBP18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Zfp449Q8CB76 518 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 CoasyQ9DBL7 563 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Cul1Q9WTX6 776 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Unc13aQ4KUS2 1712 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 TprnA2AI08 749 aaKnown RBP18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Anks1aP59672 1150 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Zc3h18Q0P678 948 aaKnown RBP18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Sorbs1Q62417 1290 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Hps6Q8BLY7 805 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 PigbQ9JJQ0 542 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Gm4841E9QAA8 417 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 PapolaQ61183 739 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 L3mbtl3Q8BLB7 883 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Catsper1Q91ZR5 686 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Cyp3a57D3YYZ0 503 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Ube4aE9Q735 1028 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Sycp3P70281 254 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Meis1Q60954 390 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Q80ZQ3 298 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Wdr27Q8C5V5 780 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Trmt44Q9D2Q2 713 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Calr3Q9D9Q6 380 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Git1Q68FF6 770 aa18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Prpf3Q922U1 683 aaKnown RBP18.57■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Kctd1Q5M956 257 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Grtp1Q9D3N8 359 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 TnnQ80Z71 1560 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Abcc12Q80WJ6 1366 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Ttll4Q80UG8 1193 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Lmbrd1Q8K0B2 537 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Exoc7O35250 697 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 GnptabQ69ZN6 1235 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Znf219Q6IQX8 726 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Cep85lA0A1W2P884 806 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Tbc1d1Q60949 1255 aa18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Prpf31Q8CCF0 499 aaKnown RBP18.56■□□□□ 0.56
Ptpre-207ENSMUST00000211140 Qtrt2B8ZXI1 415 aa18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms