RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Ccna1Q61456 421 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Slc51bQ80WK2 128 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tbx22Q8K402 517 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 JmyQ9QXM1 983 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tph1P17532 447 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Surf6P70279 355 aaKnown RBP16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Cnnm4Q69ZF7 771 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Vps52Q8C754 723 aaKnown RBP16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Epc1Q8C9X6 813 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Mtmr7Q9Z2C9 660 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Zfp174B9EJW5 407 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Axin2O88566 840 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Dnajc5P60904 198 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Dpf2Q61103 391 aaKnown RBP16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Q8CEZ4 452 aa16.99■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tspyl1O88852 379 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Lig3P97386 1015 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Nhej1Q3KNJ2 295 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tmed8Q3UHI4 326 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Carmil2Q3V3V9 1296 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Cyp2c67Q569X9 491 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Sap130Q8BIH0 1057 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 IarsQ8BU30 1262 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Iws1Q8C1D8 766 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Srgap2Q91Z67 1071 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tnrc6bQ8BKI2 1810 aaKnown RBP16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Gm45194A0A140LJG2 572 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Proca1B0QZF7 307 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Slc12a2P55012 1205 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Xxylt1Q3U4G3 392 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Ppp1r7Q3UM45 361 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tsr1Q5SWD9 803 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Pabpc4Q6PHQ9 660 aaKnown RBP16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Nek5Q7TSC3 627 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Angptl3Q9R182 455 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Nme9A0A1L1SUL6 329 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Haus4Q8BFT2 363 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Ccdc169Q8BXX9 214 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Zc3h6Q8BYK8 1177 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Zfp408H7BX78 710 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Slc9a2Q3ZAS0 814 aa16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Rbm6S4R1W5 1118 aaKnown RBP16.98■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Mdh1P14152 334 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Pabpn1lQ5XFR0 273 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Nup58Q8R332 587 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Bbs5Q9CZQ9 341 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Nup153E9Q3G8 1462 aaKnown RBP16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 A430078G23RikE9Q7Y4 484 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tmem87aQ8BXN9 555 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Rsad2Q8CBB9 362 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 LgsnQ8CIX8 563 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Sf3a3Q9D554 501 aaKnown RBP16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Gm7168A0AUV4 508 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Krt19P19001 403 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tgs1Q923W1 853 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Ftl1P29391 183 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 DeptorQ570Y9 409 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Rimbp2Q80U40 1072 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 SowahdQ8BY98 327 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Rab44Q8CB87 725 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Erp44Q9D1Q6 406 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 H2-OaQ9QWV1 250 aa16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Noc2lQ9WV70 747 aaKnown RBP16.97■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Prdm2A2A7B5 1709 aaKnown RBP16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Lcmt1A0A0U1RNF2 332 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 H2afzP0C0S6 128 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Stmn2P55821 179 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Psd3Q2PFD7 1037 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 H2afvQ3THW5 128 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Taok1Q5F2E8 1001 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Naa35Q6PHQ8 725 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Fam204aQ8C6C7 236 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Ddx39aQ8VDW0 427 aaKnown RBP16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tex21Q9R0U9 575 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 ZfxP17012 799 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 BC048507Q80ZS7 89 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Sept2P42208 361 aaKnown RBP16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Sema3eP70275 775 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Fgd5Q80UZ0 1219 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Apol7cQ8C6E1 369 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Tmem134Q8R0J4 195 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Cd2apQ9JLQ0 637 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Frmpd4A2AFR3 1320 aa16.96■□□□□ 0.31
Ccdc88b-201ENSMUST00000113440 Sclt1G5E861 688 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Becn2P0DM65 447 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Gna14P30677 355 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Kmt5aQ2YDW7 349 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Q3TTJ4 293 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 AsphQ8BSY0 741 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Spata16Q8C636 571 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Gdap1l1Q8VE33 370 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Atp5c1Q91VR2 298 aaKnown RBP16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Osbpl1aQ91XL9 950 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Ivns1abpQ920Q8 642 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Coa7Q921H9 231 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Sdr42e1Q9D665 394 aa16.96■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Pgrmc1O55022 195 aa16.95■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 LtbrP50284 415 aa16.95■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Smarcad1Q04692 1021 aa16.95■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Mxd3Q80US8 206 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms