RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Fxr2Q9WVR4 673 aaKnown RBP13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pola2P33611 600 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Sept2P42208 361 aaKnown RBP13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cct6aP80317 531 aaKnown RBP13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 PaoxQ8C0L6 504 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Trim9Q8C7M3 817 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ushbp1Q8R370 680 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Map7d1A2AJI0 846 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Lrrc32G3XA59 663 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Nck2O55033 380 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Nol4P60954 483 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Sparcl1P70663 650 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Rnf40Q3U319 1001 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ccdc33Q3ULW6 985 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Rasa3Q60790 834 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Txndc16Q7TN22 820 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Sdad1Q80UZ2 687 aaKnown RBP13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Hgh1Q8C3I8 393 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Uap1Q91YN5 522 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 MymkQ9D1N4 221 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cul5Q9D5V5 780 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 SufuQ9Z0P7 484 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Fbln1Q08879 705 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Gucy2cQ3UWA6 1072 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Trim6Q8BGE7 488 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Scfd1Q8BRF7 639 aaKnown RBP13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Syf2Q9D198 242 aaKnown RBP13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Sertad1Q9JL10 236 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Git2Q9JLQ2 708 aa13.59□□□□□ -0.23
Vamp1-203ENSMUST00000100942 NpcdF8VQB8 469 aa13.58□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Qrich1Q3UA37 777 aa13.58□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cep112Q5PR68 954 aa13.58□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Tsr1Q5SWD9 803 aa13.58□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Kif2bQ8C0N1 668 aa13.58□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ddx23D3Z0M9 819 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 C2cd2E9Q3C1 696 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Hnrnph1O35737 449 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Parp1P11103 1013 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 PpardP35396 440 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 ErfeQ6PGN1 340 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 BC048507Q80ZS7 89 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Nop9Q8BMC4 636 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Arhgef6Q8K4I3 771 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Sf3a3Q9D554 501 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Slc27a3O88561 667 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Krt18P05784 423 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 CnpP16330 420 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Hnrnph2P70333 449 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Cyp2e1Q05421 493 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Gxylt1Q3UHH8 404 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ddx49Q4FZF3 480 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Rassf10Q8BL43 508 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Tmem63cQ8CBX0 802 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Riox2Q8CD15 465 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ciapin1Q8WTY4 309 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Synpo2Q91YE8 1087 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Rrp1bQ91YK2 724 aaKnown RBP13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Gps2Q921N8 327 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Klc4Q9DBS5 619 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Copb1Q9JIF7 953 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Pkd2l2Q9JLG4 621 aa13.58□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Nedd1P33215 660 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Krt86P97861 486 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ptger2Q62053 362 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Zrsr2Q62377 462 aaKnown RBP13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Bbs9Q811G0 885 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Cyp4f39Q8BGU0 532 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ano2Q8CFW1 1002 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Phldb2Q8K1N2 1249 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Borcs6Q9D6W8 360 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 EhhadhQ9DBM2 718 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 GsdmeQ9Z2D3 512 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Gcom1E9PZ54 550 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Rad23aP54726 363 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 MyzapQ3UIJ9 466 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Foxn3Q499D0 457 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ccdc189Q6NZQ0 333 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 MslnlQ8C160 685 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Znf131Q8K3J5 619 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Tmem134Q8R0J4 195 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Prpf6Q91YR7 941 aaKnown RBP13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 ArcQ9WV31 396 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Stat2Q9WVL2 923 aa13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Zswim8Q3UHH1 1832 aaKnown RBP13.57□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Otud7bB2RUR8 840 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Apbb1ipQ8R5A3 670 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ces1Q8VCC2 565 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ttc5Q99LG4 440 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ccnt1Q9QWV9 724 aaKnown RBP13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Plcb1Q9Z1B3 1216 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ncf1Q09014 390 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Tmem232Q5K6N0 675 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Stxbp3Q60770 592 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Serpinb6Q60854 378 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Ms4a5Q810P8 197 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Q8C5C9 218 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Kiaa1024Q8K3V7 917 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 HyiQ8R1F5 277 aa13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 Tor1aip1Q921T2 595 aaKnown RBP13.56□□□□□ -0.24
Vamp1-203ENSMUST00000100942 4930550L24RikQ99PA7 320 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms