RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Bach2P97303 839 aa25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Tsen34Q8BMZ5 316 aa25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Kdm4bQ91VY5 1086 aa25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Anapc4Q91W96 807 aa25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 JcadQ5DTX6 1320 aa25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Ttc6G3UYY4 1857 aa25.45■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Becn1O88597 448 aa25.45■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Tmem63bQ3TWI9 832 aa25.45■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Mrps25Q9D125 171 aaKnown RBP25.45■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Ush1cQ9ES64 910 aa25.45■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Syt10Q9R0N4 523 aa25.45■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Syt5Q9R0N5 386 aa25.45■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Oip5A2AQ14 241 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Atp8b5A3FIN4 1183 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Nr1i2O54915 431 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Nlrx1Q3TL44 975 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Gimap3Q99MI6 301 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Wdr64Q9D565 1086 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Q9DAQ4 598 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Baiap2l1Q9DBJ3 514 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 AdnpQ9Z103 1108 aaKnown RBP25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Large1Q9Z1M7 756 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Mtmr9Q9Z2D0 545 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Xxylt1Q3U4G3 392 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Psg29Q3URN6 468 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Pgm5Q8BZF8 567 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Fbxo18Q8K2I9 1042 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 AdpgkQ8VDL4 496 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 F11Q91Y47 624 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Mx2Q9WVP9 655 aa25.44■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Wfdc16A2A5H4 111 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Map7d1A2AJI0 846 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 TxnP10639 105 aaKnown RBP25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Mansc4Q3UU94 337 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Lrrfip1Q3UZ39 729 aaKnown RBP25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Krt87Q6IMF0 495 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Zdhhc15Q8BGJ0 337 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 GlyctkQ8QZY2 523 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Ralgps2Q9ERD6 590 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Ripk3Q9QZL0 486 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Atp12aQ9Z1W8 1035 aa25.43■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Psmc4P54775 418 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Q3UK37 420 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Cfap52Q5F201 620 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Tpd52Q62393 224 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Slu7Q8BHJ9 585 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Mrpl58Q8R035 206 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Ivns1abpQ920Q8 642 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Sh2b2Q9JID9 621 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 CluhQ5SW19 1315 aa25.42■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Ccdc88cQ6VGS5 2009 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 LtkP08923 888 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Nr5a1P33242 462 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Cdc25aP48964 514 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Usp49Q6P9L4 685 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Oxsr1Q6P9R2 527 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Tubgcp2Q921G8 905 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 MbipQ99LQ1 341 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Slc26a4Q9R155 780 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Sbf1Q6ZPE2 1867 aa25.41■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Bach1P97302 739 aa25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Miga1Q4QQM5 600 aa25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Srrm1Q52KI8 946 aaKnown RBP25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Grik5Q61626 979 aa25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Taok2Q6ZQ29 1240 aa25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Dusp9Q7TNL7 452 aa25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Kcnk13Q8R1P5 405 aa25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Mmtag2Q99LX5 260 aaKnown RBP25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Leng1Q9DB98 261 aa25.4■■□□□ 1.66
Scn1b-201ENSMUST00000098548 FosP01101 380 aa25.39■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Rbm12b2Q66JV4 834 aaKnown RBP25.39■■□□□ 1.66
Scn1b-201ENSMUST00000098548 RragbQ6NTA4 374 aa25.39■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Znf784Q8BI69 297 aa25.39■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Ccdc122Q8BVN0 290 aa25.39■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Map3k20Q9ESL4 802 aaKnown RBP25.39■■□□□ 1.66
Scn1b-201ENSMUST00000098548 Gm5134E9QAB5 671 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Vmn2r71L7N2D8 855 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Nploc4P60670 608 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Mns1Q61884 491 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Gpbp1Q6NXH3 473 aaKnown RBP25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 GlmnQ8BZM1 596 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 E2f4Q8R0K9 410 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Kbtbd4Q8R179 534 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Usp26Q99MX1 835 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Krt34Q9D646 392 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Vnn1Q9Z0K8 512 aa25.39■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Grin2dQ03391 1323 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Gcnt4E9Q649 455 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Gm5624F6ZZG8 207 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Zkscan4Q5SZT6 480 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Rrp12Q6P5B0 1295 aaKnown RBP25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Atg4cQ811C2 458 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Osbpl2Q8BX94 484 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Dnajc17Q91WT4 303 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Krt82Q99M74 516 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Mxra8Q9DBV4 442 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Mkrn1Q9QXP6 481 aa25.38■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Itgb5O70309 798 aa25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Sun3Q5SS91 320 aa25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Zbtb7bQ64321 544 aa25.37■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms