RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Grtp1Q9D3N8 359 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Rmdn1Q9DCV4 305 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Knl1Q66JQ7 1612 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cul4bA2A432 970 aaKnown RBP13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cyp3a25O09158 503 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Sesn2P58043 480 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Sycp3P70281 254 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 RenbpP82343 430 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Rsad1Q5SUV1 442 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Ppp1r13bQ62415 1087 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Acad11Q80XL6 779 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Enox1Q8BHR2 643 aaKnown RBP13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Scfd1Q8BRF7 639 aaKnown RBP13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Terb1Q8C0V1 768 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Adgrb3Q80ZF8 1522 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 NeblQ0II04 452 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Sval3Q76I99 144 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Ccdc68Q8BVC4 333 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 1700016D06RikQ9DAA5 166 aa13.16□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Flt1P35969 1333 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 OcrlQ6NVF0 900 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Senp6Q6P7W0 1132 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Tmtc4Q8BG19 741 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cog5Q8C0L8 829 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Sept11Q8C1B7 431 aaKnown RBP13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cfap36Q8C6E0 343 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Prpsap2Q8R574 369 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Antxr1Q9CZ52 562 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Armc9Q9D2I5 817 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Gm9992B2RWK3 458 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Vmn2r78K7N6U5 853 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Srrm1Q52KI8 946 aaKnown RBP13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Ces3aQ63880 571 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Unc93aQ710D3 458 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cdc23Q8BGZ4 597 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Anks1bQ8BIZ1 1259 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Fermt3Q8K1B8 665 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Ces3bQ8VCU1 571 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Ska2Q9CR46 120 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 GdaQ9R111 454 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 CemipQ8BI06 1361 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 SelenovD3YXG1 328 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Orc4O88708 433 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 IvlP48997 467 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Atp11aP98197 1187 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 UrgcpQ5NCI0 926 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Meis1Q60954 390 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Zfp341Q6PGC9 846 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Pramel6Q810Y9 485 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Sptlc3Q8BG54 563 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Spata4Q8K3V1 295 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Cacnb1Q8R3Z5 597 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Pcdhb15Q91Y04 786 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Tmem132aQ922P8 1018 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Tspan17Q9D7W4 270 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Znf521Q6KAS7 1311 aa13.15□□□□□ -0.3
Col8a1-201ENSMUST00000089332 Gm15262A0A140LIQ5 728 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Casp2P29594 452 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rab20P35295 233 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 GssP51855 474 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Sh3bp1P55194 680 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ccdc185Q3V118 621 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ces1eQ64176 562 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Zfp317Q8C0Q5 607 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Mb21d2Q8C525 428 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Slc12a6Q924N4 1150 aa13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ccdc124Q9D8X2 217 aaKnown RBP13.15□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tnip3A0A1D5RMN0 279 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Xrcc6P23475 608 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Adamts18Q4VC17 1219 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Hip1Q8VD75 1029 aaKnown RBP13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Mei1Q9D4I2 1268 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Arl6ip4Q9JM93 229 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rfwd2Q9R1A8 733 aaKnown RBP13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Actn3O88990 900 aaKnown RBP13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 MybP06876 636 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rnf207Q3V3A7 635 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Pnma5Q5DTT8 618 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Sorbs1Q62417 1290 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rpap2Q8VC34 614 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Hps3Q91VB4 1002 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 PdhbQ9D051 359 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Syap1Q9D5V6 365 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tex21Q9R0U9 575 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 SfnO70456 248 aaKnown RBP13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Alppl2P24823 529 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 YwhagP61982 247 aaKnown RBP13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 CrkQ64010 304 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Ankrd6Q69ZU8 712 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Q6PD19 689 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Rassf9Q8K342 435 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Trim42Q9D2H5 723 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Stat2Q9WVL2 923 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Plcg1Q62077 1302 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Krt90E9Q1Z0 538 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Lnx1O70263 728 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Pald1P70261 859 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Nbr1P97432 988 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 Tsr1Q5SWD9 803 aa13.14□□□□□ -0.31
Col8a1-201ENSMUST00000089332 RabggtaQ9JHK4 567 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms