RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Cyp26b1Q811W2 512 aa10.89□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Nop9Q8BMC4 636 aaKnown RBP10.89□□□□□ -0.67
Smarca1-202ENSMUST00000088973 MgarpQ8VI64 283 aa10.89□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ccnyl1D3YUJ3 367 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Zfp94E9Q6Y4 486 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Casp2P29594 452 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Trim37Q6PCX9 961 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ppp2r5aQ6PD03 486 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Sept11Q8C1B7 431 aaKnown RBP10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Usp44Q8C2S0 711 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Prc1Q99K43 603 aaKnown RBP10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Zcchc17Q9ESX4 241 aaKnown RBP10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Psmg1Q9JK23 289 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Atp10aO54827 1508 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Serpinb8O08800 374 aaKnown RBP10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Tph1P17532 447 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Fhdc1Q3ULZ2 1149 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ckap2Q3V1H1 664 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Zbtb17Q60821 794 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Sorbs1Q62417 1290 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Hoxa13Q62424 386 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Prr18Q6PAN7 307 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cnksr2Q80YA9 1032 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Q80ZQ3 298 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cnot10Q8BH15 744 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Slc26a6Q8CIW6 758 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Lrrc8cQ8R502 803 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Prpf6Q91YR7 941 aaKnown RBP10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cnga4Q3UW12 575 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Mum1l1Q4VA55 681 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ppp1r13bQ62415 1087 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Med14A2ABV5 1459 aaKnown RBP10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ccdc24E9PUW8 296 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 NxnP97346 435 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Zfyve27Q3TXX3 415 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Lins1Q3U1D0 764 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ccdc160Q3UYG1 323 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Trerf1Q8BXJ2 1205 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Mfap3lQ9D3X9 409 aa10.88□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cfap221A9Q751 836 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ms4a2P20490 235 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Nr1d1Q3UV55 615 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Gucy2cQ3UWA6 1072 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ints4Q8CIM8 964 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Nrbp2Q91V36 499 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Coa7Q921H9 231 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Telo2Q9DC40 840 aaKnown RBP10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Sgk1Q9WVC6 431 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Frmpd4A2AFR3 1320 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Dynlt1P51807 113 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Gucy2eP52785 1108 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 G3bp2P97379 482 aaKnown RBP10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Otop3Q80UF9 577 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Efcab14Q8BGQ6 484 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ppp1r37Q8BKR5 712 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 EngaseQ8BX80 734 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Rint1Q8BZ36 792 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Rsph3bQ9DA80 389 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Kdm5aQ3UXZ9 1690 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 A0A286YCQ6 122 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Vmn2r78K7N6U5 853 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Casp14O89094 257 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cacnb3P54285 484 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Zdhhc9P59268 364 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 InhbaQ04998 424 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Asap3Q5U464 904 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Fam196bQ6GQV1 535 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ppp4r4Q8C0Y0 875 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Rmi1Q9D4G9 616 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Dach1Q9QYB2 751 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Aldh18a1Q9Z110 795 aa10.87□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ifi207E9Q3L4 978 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cyp7b1Q60991 507 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 GypcQ78HU7 95 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 HomezQ80W88 542 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Psmd2Q8VDM4 908 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Psip1Q99JF8 528 aaKnown RBP10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Rab20P35295 233 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 EgfrQ01279 1210 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Gm4981Q3ULJ8 291 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 AbraQ8BUZ1 375 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Arl6ip4Q9JM93 229 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Arhgap23Q69ZH9 1483 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Dnaaf5B9EJR8 853 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 4933406M09RikG3XA12 479 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Ctnnd1P30999 938 aaKnown RBP10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Snap25P60879 206 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 EnahQ03173 802 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 ItkQ03526 625 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cracr2aQ3UP38 310 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Pabpc4Q6PHQ9 660 aaKnown RBP10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Osbpl2Q8BX94 484 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Strip1Q8C079 837 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Atp5c1Q91VR2 298 aaKnown RBP10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 BlvraQ9CY64 295 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 4930449I24RikQ9D5E3 319 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Cyp3a59D3Z2W7 503 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Dpcr1Q3TNW5 500 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Qrich1Q3UA37 777 aa10.86□□□□□ -0.67
Smarca1-202ENSMUST00000088973 Nme8Q715T0 586 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms