RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Eif3hQ91WK2 352 aaKnown RBP11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Pgm1Q9D0F9 562 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Gm9774A0A0A6YVU8 407 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Mcf2A2AEU1 1111 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Gm21962L7N280 338 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Mmp8O70138 465 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Ppp2r5bQ6PD28 497 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Arhgap6O54834 987 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Kpnb1P70168 876 aaKnown RBP11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Actn1Q7TPR4 892 aaKnown RBP11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Erbb4Q61527 1308 aa11.19□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Kifc3O35231 824 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Rcn1Q05186 325 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Arhgap26Q6ZQ82 814 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Pcdhb22Q91XZ8 794 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Stk36Q69ZM6 1316 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Zyg11aA2BFL2 627 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 MafgO54790 162 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Rab20P35295 233 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Man1a2P39098 641 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Caps2Q8BUG5 550 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Washc5Q8C2E7 1159 aaKnown RBP11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Krt16Q9Z2K1 469 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Zfp212G3X8R7 492 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Gap43P06837 227 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Impdh2P24547 514 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Tmtc1Q3UV71 942 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Lzts2Q91YU6 671 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Lrrc59Q922Q8 307 aaKnown RBP11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Ddx28Q9CWT6 540 aaKnown RBP11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Fam213aQ9CYH2 218 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Arl2bpQ9D385 163 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Gm14025A2AP89 1413 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Upf3bQ3ULL6 472 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Tab3Q571K4 716 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Spata4Q8K3V1 295 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Hspa9P38647 679 aaKnown RBP11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 NsfP46460 744 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Sesn1P58006 492 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Acot10Q32MW3 439 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Zfp956Q3UZY6 572 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Thumpd3P97770 505 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Caskin1Q6P9K8 1431 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Psmc2P46471 433 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Hdac11Q91WA3 347 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 GckrQ91X44 587 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Med21Q9CQ39 144 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Dkk3Q9QUN9 349 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Rnf207Q3V3A7 635 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Fip1l1Q9D824 581 aaKnown RBP11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Shcbp1Q9Z179 668 aa11.18□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Nr1i2O54915 431 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 LdhaP06151 332 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Hmgb2P30681 210 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Fkbp3Q62446 224 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Fastkd1Q6DI86 829 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Tmem143Q8VD26 458 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Terf1P70371 421 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Atp6v1b1Q91YH6 513 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Strn3Q9ERG2 796 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Rrbp1Q99PL5 1605 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Gapvd1Q6PAR5 1458 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Naip7Q9JIB3 1402 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Naip6Q9JIB6 1403 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Gm4758L7N258 96 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Tmtc2Q56A06 836 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 CtcfQ61164 736 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Ptk6Q64434 451 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Ccz1Q8C1Y8 480 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Cdc26Q99JP4 85 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 QkiQ9QYS9 341 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Sgk1Q9WVC6 431 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Irx2P81066 474 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Pacsin1Q61644 441 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Skida1Q80YR3 822 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 NonoQ99K48 473 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Tfcp2Q9ERA0 502 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Gm5580A0A0N4SVP8 411 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Cep295nlQ497N6 533 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Fbxw10Q5SUS0 1030 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Slc6a15Q8BG16 729 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Hpcal4Q8BGZ1 191 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Parp9Q8CAS9 866 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 SmtnQ921U8 923 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Vps33aQ9D2N9 598 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Copb1Q9JIF7 953 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Prl7a2O54831 253 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Akr1b7P21300 316 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Epc1Q8C9X6 813 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 AqrQ8CFQ3 1481 aaKnown RBP11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Pfdn6Q03958 127 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Zswim7Q9CWQ2 152 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 MesdQ9ERE7 224 aa11.17□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Psmb9P28076 219 aa11.16□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Scp2P32020 547 aaKnown RBP11.16□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Exosc10P56960 887 aaKnown RBP11.16□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Tbc1d9bQ5SVR0 1263 aa11.16□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Cep70Q6IQY5 616 aa11.16□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Tmem87aQ8BXN9 555 aa11.16□□□□□ -0.62
Col6a3-201ENSMUST00000056925 Slf1Q8R3P9 1054 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms