RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Rwdd2aQ9D9S3 292 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 CenphQ9QYM8 241 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Ltbp1Q8CG19 1712 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 PtgdrP70263 357 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tbc1d9bQ5SVR0 1263 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Zmynd15Q8C0R7 736 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Leng8Q8CBY3 785 aaKnown RBP17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Ifih1Q8R5F7 1025 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Haus2Q9CQS9 234 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 CoasyQ9DBL7 563 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Inpp4aQ9EPW0 939 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Gja5Q01231 358 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 MyrflQ3UN70 904 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Igf2bp2Q5SF07 592 aaKnown RBP17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tsg101Q61187 391 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Bpifb6Q8BU51 449 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 NkrfQ8BY02 690 aaKnown RBP17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Traf3ip3Q8C0G2 513 aa17.75■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Sema3fO88632 785 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Qrich1Q3UA37 777 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tsr1Q5SWD9 803 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Trpc6Q61143 930 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Dhx37Q6NZL1 1150 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Dclk3Q8BWQ5 790 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Q8C6G1 249 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Eif3cQ8R1B4 911 aaKnown RBP17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Josd2Q9CR30 188 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Ccdc88cQ6VGS5 2009 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Krt18P05784 423 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Stac3Q8BZ71 360 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 ThegQ9JMB1 375 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Fxr2Q9WVR4 673 aaKnown RBP17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Psma7Q9Z2U0 248 aa17.74■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Akap4Q60662 849 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Stap2Q8R0L1 411 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Syf2Q9D198 242 aaKnown RBP17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 GabreA2AMW3 916 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 PurbO35295 324 aaKnown RBP17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Cyp2e1Q05421 493 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Hoxa13Q62424 386 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Ccdc189Q6NZQ0 333 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tubb2aQ7TMM9 445 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Galnt17Q7TT15 598 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 VillQ91YD6 859 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Asic2Q925H0 512 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 1700020D05RikQ99PB1 294 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tubb2bQ9CWF2 445 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tmem192Q9CXT7 266 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Nfxl1E9Q8I7 918 aaKnown RBP17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Usp17lbE9Q9U0 468 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Snx12O70493 165 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Sept2P42208 361 aaKnown RBP17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Eps15P42567 897 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Rasa2P58069 847 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Ano9P86044 747 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Fhdc1Q3ULZ2 1149 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Exoc8Q6PGF7 716 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Naa35Q6PHQ8 725 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Haus4Q8BFT2 363 aa17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Gtpbp4Q99ME9 634 aaKnown RBP17.73■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Nap1l1P28656 391 aaKnown RBP17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Vcam1P29533 739 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Lig1P37913 916 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 GnptabQ69ZN6 1235 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Creb3l3Q91XE9 479 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Plagl2Q925T4 496 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Eid1Q9DCR4 169 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Pla2g4aP47713 748 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tcerg1lQ3B807 590 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Pnma5Q5DTT8 618 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Tlr13Q6R5N8 991 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Zbed3Q9D0L1 228 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 RnmtQ9D0L8 465 aaKnown RBP17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Galnt15Q9D2N8 638 aa17.72■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Dnaaf5B9EJR8 853 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Dnajc21E9Q8D0 531 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Psmc6P62334 389 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Lrrcc1Q69ZB0 1026 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Eef1gQ9D8N0 437 aaKnown RBP17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Ccdc89Q9DA73 370 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 JcadQ5DTX6 1320 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Fnbp4Q6ZQ03 1031 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Spag7Q7TNE3 227 aaKnown RBP17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Maip1Q8BHE8 291 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Nop9Q8BMC4 636 aaKnown RBP17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Eps8l2Q99K30 729 aa17.71■□□□□ 0.43
Ckap4-201ENSMUST00000053871 Map7d1A2AJI0 846 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Pim2Q62070 370 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 CrkQ64010 304 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Papd7Q6PB75 542 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Cfap100Q80VN0 613 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Myoz2Q9JJW5 264 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Add1Q9QYC0 735 aaKnown RBP17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Tsc2Q61037 1814 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Odf2A3KGV1 830 aaKnown RBP17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Psmc2P46471 433 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 ItgadQ3V0T4 1168 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Ncapg2Q6DFV1 1138 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Tlr11Q6R5P0 926 aa17.7■□□□□ 0.42
Ckap4-201ENSMUST00000053871 Nek5Q7TSC3 627 aa17.7■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms