RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Sumf1Q8R0F3 372 aa20.01■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Apol6B7ZC55 329 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Rasgrf1P27671 1262 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Znf496Q5SXI5 585 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Usp44Q8C2S0 711 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Polr2bQ8CFI7 1174 aaKnown RBP20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ctnna1P26231 906 aaKnown RBP20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Nxf2Q4ZGD8 691 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Rmdn1Q9DCV4 305 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Carmil3Q3UFQ8 1375 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Trim66Q924W6 1242 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ncf2O70145 525 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 HlfQ8BW74 295 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Yipf1Q91VU1 306 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ebag9Q9D0V7 213 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Rps6ka2Q9WUT3 733 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Zbtb8osQ505B7 168 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Vmn1r209Q5NC97 312 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Glis3Q6XP49 780 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 RimklbQ80WS1 387 aa20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gtpbp4Q99ME9 634 aaKnown RBP20■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Brpf3B2KF05 1204 aaKnown RBP19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Fam49aQ8BHZ0 323 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 4933409G03RikQ8C5U0 320 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Mxd3Q80US8 206 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Dpp9Q8BVG4 862 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Etf1Q8BWY3 437 aaKnown RBP19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Stxbp5Q8K400 1152 aaKnown RBP19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Hecw2Q6I6G8 1578 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gdap1O88741 358 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Nr5a1P33242 462 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 LRWD1Q8BUI3 648 aaKnown RBP19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Spc24Q9D083 201 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ddx24Q9ESV0 857 aaKnown RBP19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Cyp2d11P24457 504 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ckap2Q3V1H1 664 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Prc1Q99K43 603 aaKnown RBP19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Sucla2Q9Z2I9 463 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Arhgef28P97433 1693 aa19.99■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Cyp7b1Q60991 507 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Sval3Q76I99 144 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 HgsQ99LI8 775 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Arpp19P56212 112 aaKnown RBP19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Epn1Q80VP1 575 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Cct5P80316 541 aaKnown RBP19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Fermt3Q8K1B8 665 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Dctpp1Q9QY93 170 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 4932429P05RikA2ADI4 785 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gm14525B1AZA0 212 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gm2012B1B0R1 212 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Vps41Q5KU39 853 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 SkiQ60698 725 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gm14819Q62478 212 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Mei4Q8BRM6 389 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 PpanQ91YU8 470 aaKnown RBP19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Cox16Q9CR63 106 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Chmp2aQ9DB34 222 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Usp21Q9QZL6 566 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Mmrn2A6H6E2 943 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Kif23E9Q5G3 953 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ppp1r1bQ60829 194 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Cdc37Q61081 379 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 GypcQ78HU7 95 aa19.98■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Fam47cQ14BE7 430 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Lonp1Q8CGK3 949 aaKnown RBP19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Spata4Q8K3V1 295 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Plcg1Q62077 1302 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Chrna5Q2MKA5 467 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Zbed4Q80WQ9 1168 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Magea6O89010 325 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Magea3Q6T340 320 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Casp2P29594 452 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Slc12a2P55012 1205 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Tom1l1Q923U0 474 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Psmg1Q9JK23 289 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gm7356A0A087WSA6 508 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Tcp1P11983 556 aaKnown RBP19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Dnm3Q8BZ98 863 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gpsm2Q8VDU0 679 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Zcchc8Q9CYA6 709 aaKnown RBP19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Tex21Q9R0U9 575 aa19.97■□□□□ 0.79
Scaf11-201ENSMUST00000047835 L1camP11627 1260 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Psd3Q2PFD7 1037 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Samhd1Q60710 627 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Dppa3Q8QZY3 150 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ubxn8Q9QZ49 277 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Atp10bB1AWN4 1474 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Adamts13Q769J6 1426 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Gm28042B7ZCM9 1014 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Enox1Q8BHR2 643 aaKnown RBP19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Ankrd49Q8VE42 238 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Magi2Q9WVQ1 1275 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Stag2O35638 1231 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Tlr8P58682 1032 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Pja2Q80U04 707 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Vmn1r191Q8K4D0 298 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 MlxiplQ99MZ3 864 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 A430078G23RikE9Q7Y4 484 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 NeblQ0II04 452 aa19.96■□□□□ 0.79
Scaf11-201ENSMUST00000047835 Otud5Q3U2S4 566 aa19.96■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms