RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Atrnl1Q6A051 1378 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Chrna9G3X8Z7 479 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 AurkbO70126 345 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Actn3O88990 900 aaKnown RBP9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 ThbdP15306 577 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Tph1P17532 447 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Nkx2-5P42582 318 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Cct6aP80317 531 aaKnown RBP9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Slc9a2Q3ZAS0 814 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 MaeaQ4VC33 396 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Pgrmc2Q80UU9 217 aaKnown RBP9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Cc2d1bQ8BRN9 848 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Zswim4Q8C7B8 1101 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Cd209bQ8CJ91 325 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Fam13bQ8K2H3 851 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Defb15Q8R2I5 79 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Olfr805Q8VFI4 319 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Sapcd2Q9D818 391 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Styxl1Q9DAR2 321 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Egfl6Q9JJZ5 550 aa9.41□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 PfasQ5SUR0 1337 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ccdc78D3Z5T1 437 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Etv6P97360 485 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 NfibP97863 570 aaKnown RBP9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Kctd19Q562E2 927 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Taf3Q5HZG4 932 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Shc3Q61120 474 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Dhx37Q6NZL1 1150 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ttc26Q8BS45 554 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ago4Q8CJF8 861 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Dppa3Q8QZY3 150 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ccdc12Q8R344 166 aaKnown RBP9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Dqx1Q924H9 718 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ppp1r3aQ99MR9 1089 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Snx10Q9CWT3 201 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 GrapQ9CX99 217 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Galnt15Q9D2N8 638 aa9.4□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Orc4O88708 433 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 ArP19091 899 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 EmbP21995 330 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Pola2P33611 600 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Xxylt1Q3U4G3 392 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Dph1Q5NCQ5 438 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Kiaa1211Q5PR69 1207 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Swap70Q6A028 585 aaKnown RBP9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Rexo1Q7TT28 1213 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Ankrd24Q80VM7 985 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Gmcl1Q920G9 524 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Glrx3Q9CQM9 337 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Fam217aQ9D9W6 419 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 CoasyQ9DBL7 563 aa9.4□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Dnai2A2AC93 623 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Krt36B1AQ75 473 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Msh3P13705 1091 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Nedd1P33215 660 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Rad23aP54726 363 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Stim1P70302 685 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Kcnd1Q03719 651 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Sox10Q04888 466 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Nlrx1Q3TL44 975 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Gtpbp6Q3U6U5 514 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Sec31aQ3UPL0 1230 aaKnown RBP9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Herc4Q6PAV2 1057 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Camsap3Q80VC9 1252 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Enox2Q8R0Z2 598 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Bst2Q8R2Q8 172 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Krt79Q8VED5 531 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 VillQ91YD6 859 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Prpf6Q91YR7 941 aaKnown RBP9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Apopt1Q9CQW7 192 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Rhobtb3Q9CTN4 611 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Fam187aQ9D3R5 417 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Lrp2bpQ9D4C6 346 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Phtf1Q9QZ09 761 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Usp21Q9QZL6 566 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Eif2ak1Q9Z2R9 619 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Klhdc7aA2APT9 773 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Oip5A2AQ14 241 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 MtrA6H5Y3 1253 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Scgb2b19J3QM75 112 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Actn4P57780 912 aaKnown RBP9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 YdjcQ14BV6 310 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Ccdc102aQ3TMW1 549 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Gprin1Q3UNH4 932 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Lrrfip1Q3UZ39 729 aaKnown RBP9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Gja3Q64448 417 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Eif3j2Q66JS6 263 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Ccdc189Q6NZQ0 333 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Epn1Q80VP1 575 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Gprasp2Q8BUY8 826 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Trappc12Q8K2L8 797 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Serpinb12Q9D7P9 423 aa9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Add1Q9QYC0 735 aaKnown RBP9.39□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Zfp984A2A7A2 547 aa9.38□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Apol6B7ZC55 329 aa9.38□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Mpp3O88910 568 aa9.38□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Nsun7Q14AW5 724 aa9.38□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 GmpsQ3THK7 693 aa9.38□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Uri1Q3TLD5 531 aa9.38□□□□□ -0.91
Ptchd1-201ENSMUST00000038665 Q3UJP5 209 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms