RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Fnbp1Q80TY0 616 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Parp10Q8CIE4 960 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 UvssaQ9D479 717 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Tktl2Q9D4D4 627 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Nol7Q9D7Z3 254 aaKnown RBP16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Kank3Q9Z1P7 791 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Zscan18E9PUD6 809 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Acsbg2Q2XU92 667 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Usp17leQ7M764 540 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Srp68Q8BMA6 625 aaKnown RBP16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Cc2d1bQ8BRN9 848 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 H6pdQ8CFX1 789 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Alg1Q921Q3 482 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Kctd10Q922M3 315 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ccdc105Q9D4K7 499 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Smco2Q9DA21 347 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Sept3Q9Z1S5 350 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gm30191A0A0U1RNT7 187 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Kif22Q3V300 660 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Pnma5Q5DTT8 618 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Tsg101Q61187 391 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Lca5Q80ST9 704 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Baiap3Q80TT2 1134 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Srrm3Q80WV7 648 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Scgb2b12S4R2L0 112 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gm13023A2A8N2 498 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Sec24cG3X972 1096 aaKnown RBP16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 XlrP05531 208 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 LdhaP06151 332 aaKnown RBP16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Hsd17b1P51656 344 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ell2Q3UKU1 639 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ccdc51Q3URS9 406 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gja3Q64448 417 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Krt87Q6IMF0 495 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Rhbdf1Q6PIX5 856 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ccdc181Q80ZU5 509 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Znf526Q8BI66 675 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Rufy1Q8BIJ7 712 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 3830417A13RikQ8BQJ2 303 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Slc13a4Q8BZ82 625 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Pm20d1Q8C165 503 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Cdan1Q8CC12 1239 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ube2sQ921J4 223 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Spata17Q9D552 379 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Krt34Q9D646 392 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 LrmdaQ9D9B4 229 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Slc26a4Q9R155 780 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Rps6ka4Q9Z2B9 773 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gm5114W4VSN8 858 aa16.55■□□□□ 0.24
Nup54-201ENSMUST00000038514 Map7d1A2AJI0 846 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 A430078G23RikE9Q7Y4 484 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Fgd3O88842 733 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 DnttP09838 530 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Fhdc1Q3ULZ2 1149 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Lrrc43Q3V0L5 667 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ift20Q61025 132 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Trpc6Q61143 930 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Galnt17Q7TT15 598 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 P3h4Q8K2B0 443 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Onecut3Q8K557 490 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Psmd2Q8VDM4 908 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Eif3hQ91WK2 352 aaKnown RBP16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Kif13bA0A286YCV9 1847 aa16.54■□□□□ 0.24
Nup54-201ENSMUST00000038514 Nr1i3O35627 358 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Cd44P15379 778 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Epb41l4aP52963 686 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gjb6P70689 261 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 MyrflQ3UN70 904 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Nr1d1Q3UV55 615 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Bbs9Q811G0 885 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Rab11fip4Q8BQP8 635 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Klhl20Q8VCK5 604 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 1700020D05RikQ99PB1 294 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Sertad1Q9JL10 236 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Rbm6S4R1W5 1118 aaKnown RBP16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ccdc24E9PUW8 296 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Lrrc32G3XA59 663 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gad1P48318 593 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Setd4P58467 439 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gdf10P97737 476 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Hdhd2Q3UGR5 259 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Spout1Q3UHX9 385 aaKnown RBP16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ncapg2Q6DFV1 1138 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Slc51bQ80WK2 128 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Cog5Q8C0L8 829 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Akap8Q9DBR0 687 aaKnown RBP16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Trmt112Q9DCG9 125 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ybx3Q9JKB3 361 aaKnown RBP16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Prpf40aQ9R1C7 953 aaKnown RBP16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Stat2Q9WVL2 923 aa16.53■□□□□ 0.24
Nup54-201ENSMUST00000038514 Vps33bP59016 617 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 Gas8Q60779 478 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 Krt74Q6IFZ9 495 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 Pak2Q8CIN4 524 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 IntS13Q8QZV7 732 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 GzmnQ920S1 248 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 Smc6Q924W5 1097 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 Acot3Q9QYR7 432 aa16.52■□□□□ 0.24
Nup54-201ENSMUST00000038514 Btbd18A0A0A6YY25 723 aa16.52■□□□□ 0.23
Nup54-201ENSMUST00000038514 Trim55G3X8Y1 545 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms