RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Sparcl1P70663 650 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 DpydQ8CHR6 1025 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Meis1Q60954 390 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Q6PD19 689 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 AdalQ80SY6 360 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tcp10aQ80W76 438 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 PaoxQ8C0L6 504 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 TbcbQ9D1E6 244 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 S100a5P63084 93 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Dpcr1Q3TNW5 500 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Stxbp3Q60770 592 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Elf1Q60775 612 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 NfrkbQ6PIJ4 1296 aaKnown RBP20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Mroh7A2AVR2 1279 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 NsfP46460 744 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tmem60Q8K174 133 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Psmd2Q8VDM4 908 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Trim60Q8VI40 466 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Msantd4Q91YU3 345 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Mis18aQ9CZJ6 204 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ercc4Q9QZD4 917 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Gm1661E9Q963 441 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Stkld1Q80YS9 662 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Slc17a8Q8BFU8 601 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Q8C5C9 218 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Zkscan3Q91VW9 553 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Arl6ip4Q9JM93 229 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Peg12Q9WVA7 283 aa20.08■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Prr5lA2AVJ5 370 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 DnttP09838 530 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Atp2a3Q64518 1038 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Crybg3Q80W49 1005 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Abhd8Q8R0P8 439 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Trp53inp1Q9QXE4 239 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Gm28043E0CXC2 719 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Nr5a1P33242 462 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Otop3Q80UF9 577 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 ArpinQ9D0A3 226 aa20.08■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Rad51bO35719 350 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Chp1P61022 195 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Msl1Q6PDM1 616 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 4933428M09RikQ9D3X3 192 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 AW822073A0A0N4SUK1 652 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Nub1P54729 614 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Arhgap18Q8K0Q5 663 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Fbxo3Q9DC63 480 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Lrrc6O88978 473 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Dpf2Q61103 391 aaKnown RBP20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 L3mbtl3Q8BLB7 883 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Tmem134Q8R0J4 195 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Sik3Q6P4S6 1311 aa20.07■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Cep85lA0A1W2P884 806 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Rgs9O54828 675 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Palb2Q3U0P1 1104 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Tmem132dQ76HP3 1097 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Apol11aE9PZG0 334 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Ccng2O08918 344 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 ClgnP52194 611 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Atp1b3P97370 278 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 HelqQ2VPA6 1069 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Pcdhb2Q91Y00 799 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Mrps22Q9CXW2 359 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Gm7995L7N2E4 160 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Stx2Q00262 289 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Nlrp4fQ66X05 959 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Kcnq3Q8K3F6 873 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Snx24Q9CRB0 169 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 PdhbQ9D051 359 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Ddx25Q9QY15 484 aa20.06■□□□□ 0.8
Ebf3-201ENSMUST00000033378 FosP01101 380 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 GabpaQ00422 454 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Cep126Q0VBV7 1103 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Tmed1Q3V009 227 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Ranbp17Q99NF8 1088 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Ndufb9Q9CQJ8 179 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Tcp10bE9PYJ0 438 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Cacna2d1O08532 1103 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Fen1P39749 378 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 G3bp2P97379 482 aaKnown RBP20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Dok7Q18PE0 504 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Fbxo18Q8K2I9 1042 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Eif3cQ8R1B4 911 aaKnown RBP20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Tmed2Q9R0Q3 201 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Yeats2Q3TUF7 1407 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Gm382B1AXN3 1250 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Fam81aQ3UXZ6 364 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Orc1Q9Z1N2 840 aaKnown RBP20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Arhgap42B2RQE8 841 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Arl1P61211 181 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 MagohP61327 146 aaKnown RBP20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Kctd1Q5M956 257 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Tbc1d30Q69ZT9 766 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Q8BWG4 1187 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Slc18a1Q8R090 521 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 MagohbQ9CQL1 146 aa20.05■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Hmx1O70218 332 aa20.04■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Q91WD4 421 aa20.04■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Gdf11Q9Z1W4 405 aa20.04■□□□□ 0.8
Ebf3-201ENSMUST00000033378 HnrnpcQ9Z204 313 aaKnown RBP20.04■□□□□ 0.8
Ebf3-201ENSMUST00000033378 Scg2Q03517 617 aa20.04■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms