RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C ERP2P39704 215 aa1.48□□□□□ -2.17
NIP100YPL174C TIF4631P39935 952 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C SIP4P46954 829 aa1.48□□□□□ -2.17
NIP100YPL174C URB2P47108 1174 aa1.48□□□□□ -2.17
NIP100YPL174C RBS1Q05672 457 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C TLG2Q08144 397 aa1.48□□□□□ -2.17
NIP100YPL174C AVL9Q12500 764 aa1.48□□□□□ -2.17
NIP100YPL174C YJR112W-AQ3E743 109 aa1.48□□□□□ -2.17
NIP100YPL174C FOB1O13329 566 aa1.47□□□□□ -2.17
NIP100YPL174C TOP1P04786 769 aa1.47□□□□□ -2.17
NIP100YPL174C PEP4P07267 405 aaKnown RBP1.47□□□□□ -2.17
NIP100YPL174C SPT15P13393 240 aaKnown RBP1.47□□□□□ -2.17
NIP100YPL174C YCR022CP25620 114 aa1.47□□□□□ -2.17
NIP100YPL174C TMA108P40462 946 aa1.47□□□□□ -2.17
NIP100YPL174C APT1P49435 187 aaKnown RBP1.47□□□□□ -2.17
NIP100YPL174C COQ9Q05779 260 aa1.47□□□□□ -2.17
NIP100YPL174C RTT109Q07794 436 aa1.47□□□□□ -2.17
NIP100YPL174C YEH1Q07804 573 aa1.47□□□□□ -2.17
NIP100YPL174C RLM1Q12224 676 aa1.47□□□□□ -2.17
NIP100YPL174C YLR108CQ12259 485 aa1.47□□□□□ -2.17
NIP100YPL174C CBS1P14066 229 aa1.47□□□□□ -2.17
NIP100YPL174C TCD2P36101 447 aaKnown RBP1.47□□□□□ -2.17
NIP100YPL174C DUG2P38149 878 aa1.47□□□□□ -2.17
NIP100YPL174C TIF5P38431 405 aaKnown RBP1.47□□□□□ -2.17
NIP100YPL174C HAT2P39984 401 aa1.47□□□□□ -2.17
NIP100YPL174C AVT4P50944 713 aa1.47□□□□□ -2.17
NIP100YPL174C NGL3Q03210 505 aa1.47□□□□□ -2.17
NIP100YPL174C YPT6Q99260 215 aa1.47□□□□□ -2.17
NIP100YPL174C PMR1P13586 950 aa1.46□□□□□ -2.18
NIP100YPL174C AMD1P15274 810 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C CPR4P25334 318 aa1.46□□□□□ -2.18
NIP100YPL174C NAM9P27929 486 aa1.46□□□□□ -2.18
NIP100YPL174C TIF3P34167 436 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C TCM62P38228 572 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C FAA2P39518 744 aa1.46□□□□□ -2.18
NIP100YPL174C FLC2P39719 783 aa1.46□□□□□ -2.18
NIP100YPL174C YGR210CP42942 411 aa1.46□□□□□ -2.18
NIP100YPL174C SDT1P53078 280 aa1.46□□□□□ -2.18
NIP100YPL174C OGG1P53397 376 aaPredicted RBP1.46□□□□□ -2.18
NIP100YPL174C DSL1P53847 754 aa1.46□□□□□ -2.18
NIP100YPL174C HEF3P53978 1044 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C PEX25Q02969 394 aa1.46□□□□□ -2.18
NIP100YPL174C MSC1Q03104 513 aa1.46□□□□□ -2.18
NIP100YPL174C PDS5Q04264 1277 aa1.46□□□□□ -2.18
NIP100YPL174C TSR1Q07381 788 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C YOR365CQ08844 703 aa1.46□□□□□ -2.18
NIP100YPL174C THP3Q12049 470 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C HEM15P16622 393 aa1.46□□□□□ -2.18
NIP100YPL174C PET123P17558 318 aa1.46□□□□□ -2.18
NIP100YPL174C GLK1P17709 500 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C DAL2P25335 343 aa1.46□□□□□ -2.18
NIP100YPL174C YCR100CP25606 316 aa1.46□□□□□ -2.18
NIP100YPL174C IDH2P28241 369 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C LAM5P43560 674 aa1.46□□□□□ -2.18
NIP100YPL174C RMD9P53140 646 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C SPE4Q12455 300 aa1.46□□□□□ -2.18
NIP100YPL174C RRP12Q12754 1228 aaKnown RBP1.46□□□□□ -2.18
NIP100YPL174C RVS161P25343 265 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C AFG1P32317 509 aa1.45□□□□□ -2.18
NIP100YPL174C PAH1P32567 862 aa1.45□□□□□ -2.18
NIP100YPL174C GLC7P32598 312 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C SDH3P33421 198 aa1.45□□□□□ -2.18
NIP100YPL174C YCR041WP37265 110 aa1.45□□□□□ -2.18
NIP100YPL174C NOP4P37838 685 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C FAU1P40099 211 aa1.45□□□□□ -2.18
NIP100YPL174C AIM22P47051 409 aa1.45□□□□□ -2.18
NIP100YPL174C PET130P47065 347 aa1.45□□□□□ -2.18
NIP100YPL174C BTN2P53286 410 aa1.45□□□□□ -2.18
NIP100YPL174C TOF1P53840 1238 aa1.45□□□□□ -2.18
NIP100YPL174C KAR3P17119 729 aa1.45□□□□□ -2.18
NIP100YPL174C AAC3P18238 307 aa1.45□□□□□ -2.18
NIP100YPL174C SGV1P23293 657 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C ARO2P28777 376 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C LOS1P33418 1100 aaPredicted RBP1.45□□□□□ -2.18
NIP100YPL174C RIB5P38145 238 aa1.45□□□□□ -2.18
NIP100YPL174C SRO77P38163 1010 aa1.45□□□□□ -2.18
NIP100YPL174C RRT2P38332 387 aa1.45□□□□□ -2.18
NIP100YPL174C MBB1P39534 108 aa1.45□□□□□ -2.18
NIP100YPL174C PRE5P40302 234 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C SSN8P47821 323 aa1.45□□□□□ -2.18
NIP100YPL174C YGL039WP53183 348 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C IBD2P53892 351 aa1.45□□□□□ -2.18
NIP100YPL174C ELP3Q02908 557 aaKnown RBP1.45□□□□□ -2.18
NIP100YPL174C IOC4Q04213 475 aa1.45□□□□□ -2.18
NIP100YPL174C CTI6Q08923 506 aa1.45□□□□□ -2.18
NIP100YPL174C GCN4P03069 281 aa1.44□□□□□ -2.18
NIP100YPL174C HIP1P06775 603 aa1.44□□□□□ -2.18
NIP100YPL174C NAM2P11325 894 aa1.44□□□□□ -2.18
NIP100YPL174C MTC6P38849 526 aa1.44□□□□□ -2.18
NIP100YPL174C SGN1P40561 250 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
NIP100YPL174C MDG1P53885 366 aa1.44□□□□□ -2.18
NIP100YPL174C HRI1Q05905 244 aaKnown RBP1.44□□□□□ -2.18
NIP100YPL174C BNA5Q05979 453 aa1.44□□□□□ -2.18
NIP100YPL174C REX4Q08237 289 aa1.44□□□□□ -2.18
NIP100YPL174C TMC1Q08422 150 aaPredicted RBP1.44□□□□□ -2.18
NIP100YPL174C RPL31BP0C2H9 113 aaKnown RBP1.44□□□□□ -2.18
NIP100YPL174C BUB3P26449 341 aa1.44□□□□□ -2.18
NIP100YPL174C APE2P32454 952 aaKnown RBP1.44□□□□□ -2.18
NIP100YPL174C MRPL10P36520 322 aa1.44□□□□□ -2.18
NIP100YPL174C OST1P41543 476 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 84.4 ms