RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	ECM25	P32525	599 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	SUR1	P33300	382 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	MTC2	P34246	357 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	IRS4	P36115	615 aa	Known RBP	5.2	□□□□□ -1.58
RRN3	YKL125W	ERG7	P38604	731 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	POP2	P39008	433 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	PRM9	P39551	298 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	FIR1	P40020	876 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	YIR035C	P40579	254 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	MNN5	P46982	586 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	YJL043W	P47053	257 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	HOC1	P47124	396 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	SPT20	P50875	604 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	TEP1	P53916	434 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	ENT5	Q03769	411 aa	Known RBP	5.2	□□□□□ -1.58
RRN3	YKL125W	TRM82	Q03774	444 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	CIA1	Q05583	330 aa		5.2	□□□□□ -1.58
RRN3	YKL125W	ARG82	P07250	355 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	MET8	P15807	274 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	DAL81	P21657	970 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	YCK1	P23291	538 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	NDI1	P32340	513 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	COQ2	P32378	372 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	NDC1	P32500	655 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	PDR3	P33200	976 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	TOD6	P34219	525 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	LST4	P34239	828 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	POL12	P38121	705 aa	Predicted RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	FUI1	P38196	639 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	SSH1	P38353	490 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	MSG5	P38590	489 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	KSP1	P38691	1029 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	YHK8	P38776	514 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	YHR131C	P38835	850 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	NVJ1	P38881	321 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	DUG1	P43616	481 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	UBC12	P52491	188 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
RRN3	YKL125W	CWC24	P53769	259 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	OCA2	P53949	197 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	SAM50	P53969	484 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	RNY1	Q02933	434 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	MTG1	Q03151	367 aa	Predicted RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	RSN1	Q03516	953 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	MFB1	Q04922	465 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	RTT103	Q05543	409 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	YPS7	Q06325	596 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	ARO10	Q06408	635 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	INP54	Q08227	384 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	CUE5	Q08412	411 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	FMP40	Q08968	688 aa	Predicted RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	SAM4	Q08985	325 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	AHC1	Q12433	566 aa		5.19	□□□□□ -1.58
RRN3	YKL125W	TIF6	Q12522	245 aa	Known RBP	5.19	□□□□□ -1.58
RRN3	YKL125W	YLR462W	O13556	202 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	RPS18A	P0CX55	146 aa	Known RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	RPS18B	P0CX56	146 aa	Predicted RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	RAD18	P10862	487 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	INO1	P11986	533 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	SPO16	P17122	198 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	PET9	P18239	318 aa	Known RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	YPK2	P18961	677 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	TRX1	P22217	103 aa	Known RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	PHA2	P32452	334 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	HYM1	P32464	399 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	CDC12	P32468	407 aa	Known RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	PRP21	P32524	280 aa	Predicted RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	UGP1	P32861	499 aa	Known RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	YBR056W	P38081	501 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	CST26	P38226	397 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	YHL049C	P38722	271 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	HSE1	P38753	452 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	PTC7	P38797	343 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	DUN1	P39009	513 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	SSN3	P39073	555 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	FAA2	P39518	744 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	ERV46	P39727	415 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	YEL075C	P39972	122 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	MIT1	P40002	666 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	RGI1	P40043	161 aa	Predicted RBP	5.18	□□□□□ -1.58
RRN3	YKL125W	YER189W	P40104	122 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	SLM1	P40485	686 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	VHR1	P40522	640 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	HXT9	P40885	567 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	LSB6	P42951	607 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	YFL064C	P43540	174 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	IRC8	P47046	822 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	GTO1	P48239	356 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	YGR021W	P53212	290 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	STP1	Q00947	519 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	GRS2	Q06817	618 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	DDC1	Q08949	612 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	PSY3	Q12318	242 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	SAS5	Q99314	248 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	AI5_BETA	Q9ZZX0	354 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	UBR1	P19812	1950 aa		5.18	□□□□□ -1.58
RRN3	YKL125W	PMA1	P05030	918 aa	Known RBP	5.17	□□□□□ -1.58
RRN3	YKL125W	TPK1	P06244	397 aa		5.17	□□□□□ -1.58
RRN3	YKL125W	RAD7	P06779	565 aa		5.17	□□□□□ -1.58
RRN3	YKL125W	GCR1	P07261	785 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms