RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YRR1Q12172 810 aa2.4□□□□□ -2.03
TRA1YHR099W REC8Q12188 680 aa2.4□□□□□ -2.03
TRA1YHR099W PDC1P06169 563 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W DED1P06634 604 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W QCR2P07257 368 aa2.4□□□□□ -2.03
TRA1YHR099W PDA1P16387 420 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W ADE17P38009 592 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W HYR1P40581 163 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W SDS23P53172 527 aa2.4□□□□□ -2.03
TRA1YHR099W DLT1Q04216 342 aa2.4□□□□□ -2.03
TRA1YHR099W RTT10Q08924 1013 aa2.4□□□□□ -2.03
TRA1YHR099W LEU9Q12166 604 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W RKI1Q12189 258 aa2.4□□□□□ -2.03
TRA1YHR099W TRM10Q12400 293 aa2.4□□□□□ -2.03
TRA1YHR099W PCK1P10963 549 aa2.4□□□□□ -2.03
TRA1YHR099W PET9P18239 318 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W SLY41P22215 453 aa2.4□□□□□ -2.03
TRA1YHR099W PDR3P33200 976 aa2.4□□□□□ -2.03
TRA1YHR099W TRM2P33753 639 aa2.4□□□□□ -2.03
TRA1YHR099W IST2P38250 946 aa2.4□□□□□ -2.03
TRA1YHR099W PSD1P39006 500 aa2.4□□□□□ -2.03
TRA1YHR099W BNA2P47125 453 aa2.4□□□□□ -2.03
TRA1YHR099W MRPL1Q04599 285 aa2.4□□□□□ -2.03
TRA1YHR099W CRD1Q07560 283 aa2.4□□□□□ -2.03
TRA1YHR099W MDM32Q12171 622 aa2.4□□□□□ -2.03
TRA1YHR099W RSF2P46974 1380 aa2.4□□□□□ -2.03
TRA1YHR099W MET2P08465 486 aa2.39□□□□□ -2.03
TRA1YHR099W YCK1P23291 538 aa2.39□□□□□ -2.03
TRA1YHR099W TMA19P35691 167 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W RRN10P38204 145 aa2.39□□□□□ -2.03
TRA1YHR099W YIL089WP40500 205 aa2.39□□□□□ -2.03
TRA1YHR099W KXD1P53158 218 aa2.39□□□□□ -2.03
TRA1YHR099W CSL4P53859 292 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W YNL108CP53929 270 aa2.39□□□□□ -2.03
TRA1YHR099W NSE5Q03718 556 aa2.39□□□□□ -2.03
TRA1YHR099W PLM2Q04383 521 aa2.39□□□□□ -2.03
TRA1YHR099W GMC2Q06201 188 aa2.39□□□□□ -2.03
TRA1YHR099W CCP1P00431 361 aa2.39□□□□□ -2.03
TRA1YHR099W MF(ALPHA)1P01149 165 aa2.39□□□□□ -2.03
TRA1YHR099W TYR1P20049 452 aa2.39□□□□□ -2.03
TRA1YHR099W AMS1P22855 1083 aa2.39□□□□□ -2.03
TRA1YHR099W RRP43P25359 394 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W MGR1P25573 417 aa2.39□□□□□ -2.03
TRA1YHR099W APM3P38153 483 aa2.39□□□□□ -2.03
TRA1YHR099W RRF1P38771 230 aa2.39□□□□□ -2.03
TRA1YHR099W FMO1P38866 432 aa2.39□□□□□ -2.03
TRA1YHR099W CYC2P38909 366 aa2.39□□□□□ -2.03
TRA1YHR099W PSF2P40359 213 aa2.39□□□□□ -2.03
TRA1YHR099W MLC1P53141 149 aa2.39□□□□□ -2.03
TRA1YHR099W CEG1Q01159 459 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W JIP4Q03361 876 aa2.39□□□□□ -2.03
TRA1YHR099W STE23Q06010 1027 aa2.39□□□□□ -2.03
TRA1YHR099W ARR1Q06596 294 aa2.39□□□□□ -2.03
TRA1YHR099W BCK1Q01389 1478 aa2.39□□□□□ -2.03
TRA1YHR099W YRF1-2P40105 1681 aa2.39□□□□□ -2.03
TRA1YHR099W LEU2P04173 364 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W NAB2P32505 525 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
TRA1YHR099W ARP1P38696 384 aa2.39□□□□□ -2.03
TRA1YHR099W FSH1P38777 243 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W APL6P46682 809 aa2.39□□□□□ -2.03
TRA1YHR099W TAH11P47112 604 aa2.39□□□□□ -2.03
TRA1YHR099W YNL010WP53981 241 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W PEX10Q05568 337 aa2.39□□□□□ -2.03
TRA1YHR099W RRT8Q08219 342 aa2.39□□□□□ -2.03
TRA1YHR099W CSM4Q08955 156 aa2.39□□□□□ -2.03
TRA1YHR099W AFT2Q08957 416 aa2.39□□□□□ -2.03
TRA1YHR099W RPS6AP0CX37 236 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W RPS6BP0CX38 236 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W RAD51P25454 400 aa2.39□□□□□ -2.03
TRA1YHR099W UTP11P34247 250 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W TAF14P35189 244 aa2.39□□□□□ -2.03
TRA1YHR099W ELO1P39540 310 aa2.39□□□□□ -2.03
TRA1YHR099W YGR149WP48236 432 aa2.39□□□□□ -2.03
TRA1YHR099W SKP1P52286 194 aa2.39□□□□□ -2.03
TRA1YHR099W LSM7P53905 115 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W YNL092WP53934 400 aa2.39□□□□□ -2.03
TRA1YHR099W YLR049CQ12110 428 aa2.39□□□□□ -2.03
TRA1YHR099W LTE1P07866 1435 aa2.39□□□□□ -2.03
TRA1YHR099W FUS1P11710 512 aa2.39□□□□□ -2.03
TRA1YHR099W SLM5P25345 492 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W YKR075CP36155 307 aa2.39□□□□□ -2.03
TRA1YHR099W MRPL17P36528 281 aa2.39□□□□□ -2.03
TRA1YHR099W MMS4P38257 691 aa2.39□□□□□ -2.03
TRA1YHR099W ARO9P38840 513 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W FET3P38993 636 aa2.39□□□□□ -2.03
TRA1YHR099W SIT1P39980 628 aa2.39□□□□□ -2.03
TRA1YHR099W GTT1P40582 234 aa2.39□□□□□ -2.03
TRA1YHR099W QRI7P43122 407 aa2.39□□□□□ -2.03
TRA1YHR099W NIT3P49954 291 aa2.39□□□□□ -2.03
TRA1YHR099W YGR126WP53274 230 aa2.39□□□□□ -2.03
TRA1YHR099W SLI1P53304 468 aa2.39□□□□□ -2.03
TRA1YHR099W YNL140CP53910 189 aa2.39□□□□□ -2.03
TRA1YHR099W UTP6Q02354 440 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W SVL3Q03088 825 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W URC2Q04411 772 aa2.39□□□□□ -2.03
TRA1YHR099W RSF1Q05043 376 aa2.39□□□□□ -2.03
TRA1YHR099W MDM36Q06820 579 aa2.39□□□□□ -2.03
TRA1YHR099W SKI7Q08491 747 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W SAM3Q08986 587 aa2.39□□□□□ -2.03
TRA1YHR099W HSH49Q99181 213 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms