RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W YRF1-4O13559 1382 aa3.56□□□□□ -1.84
PTI1YGR156W PUT2P07275 575 aa3.56□□□□□ -1.84
PTI1YGR156W SPE2P21182 396 aa3.56□□□□□ -1.84
PTI1YGR156W CPR2P23285 205 aa3.56□□□□□ -1.84
PTI1YGR156W CNA1P23287 553 aa3.56□□□□□ -1.84
PTI1YGR156W CLB1P24868 471 aa3.56□□□□□ -1.84
PTI1YGR156W HXT3P32466 567 aaKnown RBP3.56□□□□□ -1.84
PTI1YGR156W PIM1P36775 1133 aa3.56□□□□□ -1.84
PTI1YGR156W MSR1P38714 643 aa3.56□□□□□ -1.84
PTI1YGR156W UBA4P38820 440 aa3.56□□□□□ -1.84
PTI1YGR156W AIM22P47051 409 aa3.56□□□□□ -1.84
PTI1YGR156W TCB2P48231 1178 aa3.56□□□□□ -1.84
PTI1YGR156W ORC5P50874 479 aa3.56□□□□□ -1.84
PTI1YGR156W PYK2P52489 506 aaKnown RBP3.56□□□□□ -1.84
PTI1YGR156W YTP1P53584 459 aa3.56□□□□□ -1.84
PTI1YGR156W IPI3P53877 555 aa3.56□□□□□ -1.84
PTI1YGR156W SLG1P54867 378 aa3.56□□□□□ -1.84
PTI1YGR156W PDR8Q06149 701 aa3.56□□□□□ -1.84
PTI1YGR156W TEN1Q07921 160 aa3.56□□□□□ -1.84
PTI1YGR156W MLH2Q07980 695 aa3.56□□□□□ -1.84
PTI1YGR156W PFA4Q12006 378 aa3.56□□□□□ -1.84
PTI1YGR156W ISA2Q12425 185 aa3.56□□□□□ -1.84
PTI1YGR156W CBP1P07252 654 aa3.55□□□□□ -1.84
PTI1YGR156W RAP1P11938 827 aa3.55□□□□□ -1.84
PTI1YGR156W NAT1P12945 854 aaKnown RBP3.55□□□□□ -1.84
PTI1YGR156W TPM1P17536 199 aaKnown RBP3.55□□□□□ -1.84
PTI1YGR156W PRP2P20095 876 aaPredicted RBP3.55□□□□□ -1.84
PTI1YGR156W IDH2P28241 369 aaKnown RBP3.55□□□□□ -1.84
PTI1YGR156W PUP2P32379 260 aa3.55□□□□□ -1.84
PTI1YGR156W RML2P32611 393 aa3.55□□□□□ -1.84
PTI1YGR156W LEU5P38702 357 aa3.55□□□□□ -1.84
PTI1YGR156W CIN4P39110 191 aa3.55□□□□□ -1.84
PTI1YGR156W SSU1P41930 458 aa3.55□□□□□ -1.84
PTI1YGR156W BUD27P43573 796 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
PTI1YGR156W PFA5Q03289 374 aa3.55□□□□□ -1.84
PTI1YGR156W EMI2Q04409 500 aaKnown RBP3.55□□□□□ -1.84
PTI1YGR156W AIM32Q04689 311 aa3.55□□□□□ -1.84
PTI1YGR156W ROY1Q04847 553 aa3.55□□□□□ -1.84
PTI1YGR156W COQ9Q05779 260 aa3.55□□□□□ -1.84
PTI1YGR156W ATG26Q06321 1198 aa3.55□□□□□ -1.84
PTI1YGR156W MCH4Q08268 501 aa3.55□□□□□ -1.84
PTI1YGR156W MDH1P17505 334 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
PTI1YGR156W ERV1P27882 189 aa3.54□□□□□ -1.84
PTI1YGR156W PAP1P29468 568 aaKnown RBP3.54□□□□□ -1.84
PTI1YGR156W MSS51P32335 436 aa3.54□□□□□ -1.84
PTI1YGR156W YKL100CP34248 587 aa3.54□□□□□ -1.84
PTI1YGR156W DRN1P53255 507 aaKnown RBP3.54□□□□□ -1.84
PTI1YGR156W KAP120Q02932 1032 aa3.54□□□□□ -1.84
PTI1YGR156W YMR160WQ03823 816 aa3.54□□□□□ -1.84
PTI1YGR156W GSH2Q08220 491 aa3.54□□□□□ -1.84
PTI1YGR156W PEP4P07267 405 aaKnown RBP3.53□□□□□ -1.84
PTI1YGR156W RPL31BP0C2H9 113 aaKnown RBP3.53□□□□□ -1.84
PTI1YGR156W REC107P21651 314 aa3.53□□□□□ -1.84
PTI1YGR156W YCR006CP25350 157 aa3.53□□□□□ -1.84
PTI1YGR156W GEX1P25596 615 aa3.53□□□□□ -1.84
PTI1YGR156W RPL32P38061 130 aaKnown RBP3.53□□□□□ -1.84
PTI1YGR156W THI2P38141 450 aa3.53□□□□□ -1.84
PTI1YGR156W ICS2P38284 255 aa3.53□□□□□ -1.84
PTI1YGR156W DBP8P38719 431 aa3.53□□□□□ -1.84
PTI1YGR156W ANS1P38832 159 aa3.53□□□□□ -1.84
PTI1YGR156W CAJ1P39101 391 aa3.53□□□□□ -1.84
PTI1YGR156W PHO90P39535 881 aa3.53□□□□□ -1.84
PTI1YGR156W AFG3P39925 761 aa3.53□□□□□ -1.84
PTI1YGR156W YMR147WP40218 223 aaKnown RBP3.53□□□□□ -1.84
PTI1YGR156W PTR3P43606 678 aa3.53□□□□□ -1.84
PTI1YGR156W YGR016WP53209 190 aa3.53□□□□□ -1.84
PTI1YGR156W RSM23Q01163 450 aa3.53□□□□□ -1.84
PTI1YGR156W TOF2Q02208 771 aa3.53□□□□□ -1.84
PTI1YGR156W OAZ1Q02803 292 aa3.53□□□□□ -1.84
PTI1YGR156W ERO1Q03103 563 aa3.53□□□□□ -1.84
PTI1YGR156W CAC2Q04199 468 aa3.53□□□□□ -1.84
PTI1YGR156W PDS5Q04264 1277 aa3.53□□□□□ -1.84
PTI1YGR156W SWF1Q04629 336 aa3.53□□□□□ -1.84
PTI1YGR156W YMR317WQ04893 1140 aa3.53□□□□□ -1.84
PTI1YGR156W YLR281CQ05863 155 aa3.53□□□□□ -1.84
PTI1YGR156W FMP45Q07651 309 aa3.53□□□□□ -1.84
PTI1YGR156W YOR365CQ08844 703 aa3.53□□□□□ -1.84
PTI1YGR156W FRE3Q08905 711 aa3.53□□□□□ -1.84
PTI1YGR156W YLR049CQ12110 428 aa3.53□□□□□ -1.84
PTI1YGR156W PDH1Q12428 516 aaKnown RBP3.53□□□□□ -1.84
PTI1YGR156W SKS1Q12505 502 aa3.53□□□□□ -1.84
PTI1YGR156W ARG81P05085 880 aa3.52□□□□□ -1.85
PTI1YGR156W RRP7P25368 297 aaPredicted RBP3.52□□□□□ -1.85
PTI1YGR156W VPH1P32563 840 aaKnown RBP3.52□□□□□ -1.85
PTI1YGR156W YME1P32795 747 aa3.52□□□□□ -1.85
PTI1YGR156W TUL1P36096 758 aa3.52□□□□□ -1.85
PTI1YGR156W FMP46P36141 133 aaKnown RBP3.52□□□□□ -1.85
PTI1YGR156W RXT2P38255 430 aa3.52□□□□□ -1.85
PTI1YGR156W YHR210CP38893 341 aa3.52□□□□□ -1.85
PTI1YGR156W HXT9P40885 567 aa3.52□□□□□ -1.85
PTI1YGR156W ZIM17P42844 174 aa3.52□□□□□ -1.85
PTI1YGR156W CAK1P43568 368 aaPredicted RBP3.52□□□□□ -1.85
PTI1YGR156W ATG27P46989 271 aa3.52□□□□□ -1.85
PTI1YGR156W ART5P53244 586 aaKnown RBP3.52□□□□□ -1.85
PTI1YGR156W DON1Q05610 365 aa3.52□□□□□ -1.85
PTI1YGR156W RRD2Q12461 358 aa3.52□□□□□ -1.85
PTI1YGR156W PAR32Q12515 295 aaKnown RBP3.52□□□□□ -1.85
PTI1YGR156W AFI1Q99222 893 aa3.52□□□□□ -1.85
PTI1YGR156W MNE1P24720 663 aa3.51□□□□□ -1.85
PTI1YGR156W YME2P32843 850 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms