RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W OSH3P38713 996 aaKnown RBP3.26□□□□□ -1.89
SEC4YFL005W BZZ1P38822 633 aa3.26□□□□□ -1.89
SEC4YFL005W YND1P40009 630 aa3.26□□□□□ -1.89
SEC4YFL005W VMA13P41807 478 aaKnown RBP3.26□□□□□ -1.89
SEC4YFL005W SSU1P41930 458 aa3.26□□□□□ -1.89
SEC4YFL005W URB2P47108 1174 aa3.26□□□□□ -1.89
SEC4YFL005W YGR149WP48236 432 aa3.26□□□□□ -1.89
SEC4YFL005W MNP1P53163 194 aaPredicted RBP3.26□□□□□ -1.89
SEC4YFL005W LSC1P53598 329 aaKnown RBP3.26□□□□□ -1.89
SEC4YFL005W SLD5Q03406 294 aa3.26□□□□□ -1.89
SEC4YFL005W NUP53Q03790 475 aa3.26□□□□□ -1.89
SEC4YFL005W IVY1Q04934 453 aa3.26□□□□□ -1.89
SEC4YFL005W CSR2Q12734 1121 aa3.26□□□□□ -1.89
SEC4YFL005W YRF1-4O13559 1382 aa3.25□□□□□ -1.89
SEC4YFL005W CDC23P16522 626 aa3.25□□□□□ -1.89
SEC4YFL005W PPH22P23595 377 aa3.25□□□□□ -1.89
SEC4YFL005W YCR051WP25631 222 aa3.25□□□□□ -1.89
SEC4YFL005W RML2P32611 393 aa3.25□□□□□ -1.89
SEC4YFL005W TUL1P36096 758 aa3.25□□□□□ -1.89
SEC4YFL005W DIM1P41819 318 aaKnown RBP3.25□□□□□ -1.89
SEC4YFL005W SCD6P45978 349 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
SEC4YFL005W OCA1P50946 238 aaPredicted RBP3.25□□□□□ -1.89
SEC4YFL005W RMD9P53140 646 aaKnown RBP3.25□□□□□ -1.89
SEC4YFL005W GPI1P53306 609 aa3.25□□□□□ -1.89
SEC4YFL005W RBA50Q04418 439 aa3.25□□□□□ -1.89
SEC4YFL005W BNA5Q05979 453 aa3.25□□□□□ -1.89
SEC4YFL005W PHO92Q06390 306 aa3.25□□□□□ -1.89
SEC4YFL005W GPH1P06738 902 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W AMD1P15274 810 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W GLK1P17709 500 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W FUN19P28003 413 aaPredicted RBP3.24□□□□□ -1.89
SEC4YFL005W IDH2P28241 369 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W ATP11P32453 318 aa3.24□□□□□ -1.89
SEC4YFL005W GYP6P32806 458 aa3.24□□□□□ -1.89
SEC4YFL005W RIM2P38127 377 aa3.24□□□□□ -1.89
SEC4YFL005W KEL1P38853 1164 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W YMR147WP40218 223 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W YJL068CP40363 299 aa3.24□□□□□ -1.89
SEC4YFL005W POP1P41812 875 aa3.24□□□□□ -1.89
SEC4YFL005W SAD1P43589 448 aa3.24□□□□□ -1.89
SEC4YFL005W FMS1P50264 508 aa3.24□□□□□ -1.89
SEC4YFL005W ARX1Q03862 593 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W YMR087WQ04299 284 aa3.24□□□□□ -1.89
SEC4YFL005W SYO1Q07395 620 aa3.24□□□□□ -1.89
SEC4YFL005W CFT2Q12102 859 aaPredicted RBP3.24□□□□□ -1.89
SEC4YFL005W LSP1Q12230 341 aaKnown RBP3.24□□□□□ -1.89
SEC4YFL005W MES1P00958 751 aaKnown RBP3.23□□□□□ -1.89
SEC4YFL005W ATP10P18496 279 aa3.23□□□□□ -1.89
SEC4YFL005W EXO70P19658 623 aa3.23□□□□□ -1.89
SEC4YFL005W SNT1P25357 1226 aa3.23□□□□□ -1.89
SEC4YFL005W VMA8P32610 256 aaKnown RBP3.23□□□□□ -1.89
SEC4YFL005W YME2P32843 850 aa3.23□□□□□ -1.89
SEC4YFL005W SIP2P34164 415 aaKnown RBP3.23□□□□□ -1.89
SEC4YFL005W GCS1P35197 352 aa3.23□□□□□ -1.89
SEC4YFL005W STB6P36085 766 aa3.23□□□□□ -1.89
SEC4YFL005W THI2P38141 450 aa3.23□□□□□ -1.89
SEC4YFL005W NTC20P38302 140 aaPredicted RBP3.23□□□□□ -1.89
SEC4YFL005W SYG1P40528 902 aa3.23□□□□□ -1.89
SEC4YFL005W BNI5P53890 448 aaKnown RBP3.23□□□□□ -1.89
SEC4YFL005W RPM2Q02773 1202 aa3.23□□□□□ -1.89
SEC4YFL005W KAP120Q02932 1032 aa3.23□□□□□ -1.89
SEC4YFL005W RMT2Q03305 412 aa3.23□□□□□ -1.89
SEC4YFL005W ROY1Q04847 553 aa3.23□□□□□ -1.89
SEC4YFL005W RRP45Q05636 305 aaKnown RBP3.23□□□□□ -1.89
SEC4YFL005W MRPL51Q06090 140 aaPredicted RBP3.23□□□□□ -1.89
SEC4YFL005W GRS2Q06817 618 aa3.23□□□□□ -1.89
SEC4YFL005W NRT1Q08485 598 aa3.23□□□□□ -1.89
SEC4YFL005W KEL3Q08979 651 aaPredicted RBP3.23□□□□□ -1.89
SEC4YFL005W YDL009CQ12210 107 aa3.23□□□□□ -1.89
SEC4YFL005W ISA2Q12425 185 aa3.23□□□□□ -1.89
SEC4YFL005W SMC6Q12749 1114 aa3.23□□□□□ -1.89
SEC4YFL005W ISN1Q99312 450 aa3.23□□□□□ -1.89
SEC4YFL005W CAR1P00812 333 aaKnown RBP3.22□□□□□ -1.89
SEC4YFL005W YIM1P28625 365 aa3.22□□□□□ -1.89
SEC4YFL005W SEC1P30619 724 aaKnown RBP3.22□□□□□ -1.89
SEC4YFL005W FRE1P32791 686 aa3.22□□□□□ -1.89
SEC4YFL005W REC114P32841 428 aa3.22□□□□□ -1.89
SEC4YFL005W PXA2P34230 853 aa3.22□□□□□ -1.89
SEC4YFL005W CBP4P37267 147 aa3.22□□□□□ -1.89
SEC4YFL005W SRP72P38688 640 aaKnown RBP3.22□□□□□ -1.89
SEC4YFL005W VPS52P39904 641 aa3.22□□□□□ -1.89
SEC4YFL005W TFG2P41896 400 aaPredicted RBP3.22□□□□□ -1.89
SEC4YFL005W COS5P47187 383 aa3.22□□□□□ -1.89
SEC4YFL005W YML6P51998 286 aa3.22□□□□□ -1.89
SEC4YFL005W GIS2P53849 153 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89 RIP-Chip
SEC4YFL005W IRC15Q02733 499 aa3.22□□□□□ -1.89
SEC4YFL005W ERB1Q04660 807 aaKnown RBP3.22□□□□□ -1.89
SEC4YFL005W SOV1Q04748 898 aa3.22□□□□□ -1.89
SEC4YFL005W DON1Q05610 365 aa3.22□□□□□ -1.89
SEC4YFL005W VPS74Q06385 345 aa3.22□□□□□ -1.89
SEC4YFL005W COS7Q07788 383 aa3.22□□□□□ -1.89
SEC4YFL005W SIL1Q08199 421 aa3.22□□□□□ -1.89
SEC4YFL005W RRD2Q12461 358 aa3.22□□□□□ -1.89
SEC4YFL005W AFI1Q99222 893 aa3.22□□□□□ -1.89
SEC4YFL005W LEU4P06208 619 aaKnown RBP3.21□□□□□ -1.9
SEC4YFL005W NOP1P15646 327 aaKnown RBP3.21□□□□□ -1.9
SEC4YFL005W BUB3P26449 341 aa3.21□□□□□ -1.9
SEC4YFL005W PPZ1P26570 692 aa3.21□□□□□ -1.9
SEC4YFL005W URA7P28274 579 aaKnown RBP3.21□□□□□ -1.9
SEC4YFL005W PIM1P36775 1133 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms